[med-svn] r23336 - trunk/packages/R/r-cran-adephylo/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-12-20 13:03:04 +0000 (Tue, 20 Dec 2016)
New Revision: 23336

Modified:
   trunk/packages/R/r-cran-adephylo/trunk/debian/README.test
   trunk/packages/R/r-cran-adephylo/trunk/debian/changelog
   trunk/packages/R/r-cran-adephylo/trunk/debian/compat
   trunk/packages/R/r-cran-adephylo/trunk/debian/control
   trunk/packages/R/r-cran-adephylo/trunk/debian/copyright
   trunk/packages/R/r-cran-adephylo/trunk/debian/rules
   trunk/packages/R/r-cran-adephylo/trunk/debian/watch
Log:
  * New upstream version
  * Convert to dh-r
  * Canonical homepage for CRAN
  * Update d/copyright
  * d/watch: version=4
  * debhelper 10


Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/README.test	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/README.test	2016-12-20 13:03:04 UTC (rev 23336)
@@ -3,7 +3,6 @@
 
 This package can be tested by running the provided test:
 
-cd tests
-LC_ALL=C R --no-save < testthat.R
+   sh run-unit-test
 
 in order to confirm its integrity.

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/changelog	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/changelog	2016-12-20 13:03:04 UTC (rev 23336)
@@ -1,8 +1,14 @@
-r-cran-adephylo (1.1-6-2) UNRELEASED; urgency=medium
+r-cran-adephylo (1.1-10-1) unstable; urgency=medium
 
+  * New upstream version
   * Fix cut-n-pasto (thanks to Michael Hudson-Doyle)
+  * Convert to dh-r
+  * Canonical homepage for CRAN
+  * Update d/copyright
+  * d/watch: version=4
+  * debhelper 10
 
- -- Andreas Tille <tille at debian.org>  Thu, 30 Jun 2016 08:43:30 +0200
+ -- Andreas Tille <tille at debian.org>  Tue, 20 Dec 2016 11:19:17 +0100
 
 r-cran-adephylo (1.1-6-1) unstable; urgency=low
 

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/compat	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/compat	2016-12-20 13:03:04 UTC (rev 23336)
@@ -1 +1 @@
-9
+10

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/control	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/control	2016-12-20 13:03:04 UTC (rev 23336)
@@ -3,8 +3,8 @@
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
 Priority: optional
-Build-Depends: debhelper (>= 9),
-               cdbs,
+Build-Depends: debhelper (>= 10),
+               dh-r,
                r-base-dev,
                r-cran-ade4,
                r-cran-ape,
@@ -13,17 +13,15 @@
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-adephylo/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-adephylo/trunk/
-Homepage: https://cran.r-project.org/web/packages/adephylo/
+Homepage: https://cran.r-project.org/package=adephylo
 
 Package: r-cran-adephylo
 Architecture: any
 Depends: ${misc:Depends},
          ${shlibs:Depends},
-         ${R:Depends},
-         r-cran-ade4,
-         r-cran-ape,
-         r-cran-phylobase,
-         r-cran-adegenet
+         ${R:Depends}
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: GNU R exploratory analyses for the phylogenetic comparative method
  This GNU R package provides multivariate tools to analyze comparative
  data, i.e. a phylogeny and some traits measured for each taxa.

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/copyright	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/copyright	2016-12-20 13:03:04 UTC (rev 23336)
@@ -1,10 +1,12 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Contact: Thibaut Jombart <t.jombart at imperial.ac.uk>
-Source: https://cran.r-project.org/web/packages/adephylo/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Contact: Stéphane Dray <stephane.dray at univ-lyon1.fr>
+Upstream-Name: adephylo
+Source: https://cran.r-project.org/package=adephylo
 
 Files: *
 Copyright: 2013-2016 Thibaut Jombart <thibautjombart at gmail.com>,
-                     Stephane Dray
+                     Stephane Dray <stephane.dray at univ-lyon1.fr>,
+                     Anders Ellern Bilgrau
 License: GPL-2+
 
 Files: debian/*

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/rules	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/rules	2016-12-20 13:03:04 UTC (rev 23336)
@@ -1,3 +1,4 @@
 #!/usr/bin/make -f
 
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R

Modified: trunk/packages/R/r-cran-adephylo/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-cran-adephylo/trunk/debian/watch	2016-12-20 10:42:49 UTC (rev 23335)
+++ trunk/packages/R/r-cran-adephylo/trunk/debian/watch	2016-12-20 13:03:04 UTC (rev 23336)
@@ -1,3 +1,3 @@
-version=3
+version=4
 http://cran.r-project.org/src/contrib/adephylo_([-0-9\.]*).tar.gz