[med-svn] [clustalo] 03/06: Merge tag 'upstream/1.2.4'

[Andreas Tille]

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tille pushed a commit to branch master
in repository clustalo.

commit 9f856017affc05c296f899da9af8aaa8359e4bcc
Merge: 417cc01 e110e70
Author: Andreas Tille <tille at debian.org>
Date:   Wed Dec 21 21:02:21 2016 +0100

    Merge tag 'upstream/1.2.4'
    
    Upstream version 1.2.4

 ChangeLog                       |   6 +
 Doxyfile                        |   2 +-
 INSTALL                         | 118 +--------
 configure                       |  20 +-
 configure.ac                    |   7 +-
 depcomp                         | 531 ++++++++++++++++++++++++++--------------
 install-sh                      | 392 ++++++++++++++---------------
 missing                         | 461 ++++++++++++----------------------
 src/clustal-omega-config.h      |   6 +-
 src/clustal/mbed.c              |   8 +-
 src/hhalign/hhalignment-C.h     | 146 +++++------
 src/hhalign/hhfullalignment-C.h |   6 +-
 src/hhalign/hhhalfalignment-C.h |  10 +-
 src/hhalign/hhhit-C.h           | 106 ++++----
 src/hhalign/hhhitlist-C.h       | 162 ++++++------
 src/hhalign/hhhmm-C.h           |  58 ++---
 src/hhalign/hhmatrices-C.h      |  24 +-
 src/hhalign/hhutil-C.h          |   6 +-
 src/hhalign/util-C.h            |  12 +-
 src/squid/clustal.c             |   6 +-
 src/squid/hsregex.c             |   4 +-
 src/squid/msf.c                 |   8 +-
 22 files changed, 1004 insertions(+), 1095 deletions(-)

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