[med-svn] [clustalo] branch upstream updated (f12a8dc -> e110e70)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch upstream
in repository clustalo.

      from  f12a8dc   Imported Upstream version 1.2.3
       new  e110e70   New upstream version 1.2.4

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 ChangeLog                       |   6 +
 Doxyfile                        |   2 +-
 INSTALL                         | 118 +--------
 configure                       |  20 +-
 configure.ac                    |   7 +-
 depcomp                         | 531 ++++++++++++++++++++++++++--------------
 install-sh                      | 392 ++++++++++++++---------------
 missing                         | 461 ++++++++++++----------------------
 src/clustal-omega-config.h      |   6 +-
 src/clustal/mbed.c              |   8 +-
 src/hhalign/hhalignment-C.h     | 146 +++++------
 src/hhalign/hhfullalignment-C.h |   6 +-
 src/hhalign/hhhalfalignment-C.h |  10 +-
 src/hhalign/hhhit-C.h           | 106 ++++----
 src/hhalign/hhhitlist-C.h       | 162 ++++++------
 src/hhalign/hhhmm-C.h           |  58 ++---
 src/hhalign/hhmatrices-C.h      |  24 +-
 src/hhalign/hhutil-C.h          |   6 +-
 src/hhalign/util-C.h            |  12 +-
 src/squid/clustal.c             |   6 +-
 src/squid/hsregex.c             |   4 +-
 src/squid/msf.c                 |   8 +-
 22 files changed, 1004 insertions(+), 1095 deletions(-)
 mode change 100755 => 100644 ChangeLog

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/clustalo.git