[med-svn] [kineticstools] branch master updated (c5ebe7e -> ecf5447)
Andreas Tille
tille at debian.org
Sat Dec 24 14:11:27 UTC 2016
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tille pushed a change to branch master
in repository kineticstools.
from c5ebe7e Merge tag 'upstream/0.6.1+dfsg'
new 26bf6dc Create get-orig-source script to download upstream source
new d210089 New upstream version 0.6.1+dfsg
new be06059 Merge tag 'upstream/0.6.1+dfsg'
new 34e6c9f Close bug
new ecf5447 Adapt patches and and TODO
The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
.gitignore | 5 -
Makefile | 9 +-
circle.yml | 1 +
debian/changelog | 12 ++
debian/get-orig-source | 33 ++++
...activate-tests-requiring-unavailable-data.patch | 12 +-
debian/patches/man-pages.patch | 26 +--
debian/patches/verbose-testing.patch | 14 +-
doc/whitepaper/ecoli-roc.png | Bin 0 -> 26253 bytes
doc/whitepaper/kinetics.bib | 92 +++++++++++
doc/whitepaper/kinetics.pdf | Bin 0 -> 399628 bytes
doc/whitepaper/kinetics.tex | 183 +++++++++++++++++++++
doc/whitepaper/logo.jpg | Bin 0 -> 22613 bytes
doc/whitepaper/position-influence.png | Bin 0 -> 88200 bytes
requirements-ci.txt | 8 +-
requirements-dev.txt | 1 +
requirements-ci.txt => requirements-pb.txt | 10 --
test/cram/detection_bam.t | 4 +-
test/cram/detection_bam_dataset.t | 4 +-
test/cram/detection_bam_lossless.t | 2 +-
test/cram/extra/bigwig.t | 2 +-
21 files changed, 363 insertions(+), 55 deletions(-)
delete mode 100644 .gitignore
create mode 100755 debian/get-orig-source
create mode 100644 doc/whitepaper/ecoli-roc.png
create mode 100644 doc/whitepaper/kinetics.bib
create mode 100644 doc/whitepaper/kinetics.pdf
create mode 100644 doc/whitepaper/kinetics.tex
create mode 100644 doc/whitepaper/logo.jpg
create mode 100644 doc/whitepaper/position-influence.png
copy requirements-ci.txt => requirements-pb.txt (63%)
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