[med-svn] [kineticstools] branch upstream updated (737e596 -> d210089)

[Andreas Tille]

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tille pushed a change to branch upstream
in repository kineticstools.

      from  737e596   Imported Upstream version 0.6.1+dfsg
       new  d210089   New upstream version 0.6.1+dfsg

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .gitignore                                 |   5 -
 Makefile                                   |   9 +-
 circle.yml                                 |   1 +
 doc/whitepaper/ecoli-roc.png               | Bin 0 -> 26253 bytes
 doc/whitepaper/kinetics.bib                |  92 +++++++++++++++
 doc/whitepaper/kinetics.pdf                | Bin 0 -> 399628 bytes
 doc/whitepaper/kinetics.tex                | 183 +++++++++++++++++++++++++++++
 doc/whitepaper/logo.jpg                    | Bin 0 -> 22613 bytes
 doc/whitepaper/position-influence.png      | Bin 0 -> 88200 bytes
 requirements-ci.txt                        |   8 +-
 requirements-dev.txt                       |   1 +
 requirements-ci.txt => requirements-pb.txt |  10 --
 test/cram/detection_bam.t                  |   4 +-
 test/cram/detection_bam_dataset.t          |   4 +-
 test/cram/detection_bam_lossless.t         |   2 +-
 test/cram/extra/bigwig.t                   |   2 +-
 16 files changed, 292 insertions(+), 29 deletions(-)
 delete mode 100644 .gitignore
 create mode 100644 doc/whitepaper/ecoli-roc.png
 create mode 100644 doc/whitepaper/kinetics.bib
 create mode 100644 doc/whitepaper/kinetics.pdf
 create mode 100644 doc/whitepaper/kinetics.tex
 create mode 100644 doc/whitepaper/logo.jpg
 create mode 100644 doc/whitepaper/position-influence.png
 copy requirements-ci.txt => requirements-pb.txt (63%)

-- 
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