[med-svn] [fast5] branch master updated (85d6000 -> 278f4f6)

[Afif Elghraoui]

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afif pushed a change to branch master
in repository fast5.

      from  85d6000   releasing package fast5 version 0.5.8-1
       new  d798d48   Imported Upstream version 0.5.9
       new  b1efd71   Merge tag 'upstream/0.5.9'
       new  278f4f6   Update patches

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Summary of changes:
 .travis.yml                            |   2 +-
 README.org                             |  49 ++++-
 VERSION                                |   2 +-
 debian/patches/examples.patch          |  28 ++-
 python/fast5/version.py                |   2 +-
 python/setup.py                        |   2 +-
 src/.gitignore                         |   5 +-
 src/Makefile                           |  14 +-
 src/f5dump.cpp                         | 366 +++++++++++++++++++--------------
 src/{f5dump-full.cpp => f5ls-full.cpp} |   0
 src/{f5dump.cpp => f5ls.cpp}           |   0
 src/fast5.hpp                          | 169 +++++++++++----
 src/hdf5-mod.cpp                       |   2 +-
 13 files changed, 433 insertions(+), 208 deletions(-)
 mode change 100755 => 100644 python/setup.py
 rename src/{f5dump-full.cpp => f5ls-full.cpp} (100%)
 copy src/{f5dump.cpp => f5ls.cpp} (100%)

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