[med-svn] [sra-sdk] 01/01: Introduced EDAM annotation.

Steffen Möller moeller at moszumanska.debian.org
Sat Feb 6 10:40:00 UTC 2016


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moeller pushed a commit to branch master
in repository sra-sdk.

commit a246fc13e1c1342e9352ff644aef913e93849b58
Author: Steffen Moeller <moeller at debian.org>
Date:   Sat Feb 6 11:39:37 2016 +0100

    Introduced EDAM annotation.
---
 debian/changelog     |  3 +++
 debian/upstream/edam | 16 ++++++++++++++++
 2 files changed, 19 insertions(+)

diff --git a/debian/changelog b/debian/changelog
index 9d34f27..a75d800 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -7,6 +7,9 @@ sra-sdk (2.5.7-1) UNRELEASED; urgency=medium
   * New Build-Depends: libhdf5-dev
   TODO: package ngs-sdk (https://github.com/ncbi/ngs)
 
+  [ Steffen Moeller and Jon Ison ]
+  * Introduced EDAM annotation to debian/upstream/edam
+
  -- Andreas Tille <tille at debian.org>  Wed, 30 Dec 2015 08:41:30 +0100
 
 sra-sdk (2.3.5-2+dfsg-1) unstable; urgency=medium
diff --git a/debian/upstream/edam b/debian/upstream/edam
new file mode 100644
index 0000000..0be286a
--- /dev/null
+++ b/debian/upstream/edam
@@ -0,0 +1,16 @@
+ontology: EDAM (1.13)
+topic:
+  - Sequencing
+scopes:
+  - name: summary
+    function:
+     - File handling
+     - Statistics
+    inputs:
+     - data:   Sequence
+       formats: [SRA,SAM,BAM,ABI,FASTA]
+    outputs:
+     - data:   Sequence
+       formats: [SRA,VDB,SAM,BAM,ABI,FASTA]
+     - data:   Report
+       formats: [Text,XML,SFF]

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