[med-svn] [artemis] 01/01: Introduced EDAM annotation

Steffen Möller moeller at moszumanska.debian.org
Sat Feb 6 16:22:31 UTC 2016


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moeller pushed a commit to branch master
in repository artemis.

commit 77055e9fff070b7a9c703ca5eb4efe6cfaac68ce
Author: Steffen Moeller <moeller at debian.org>
Date:   Sat Feb 6 17:22:26 2016 +0100

    Introduced EDAM annotation
---
 debian/changelog     |  3 ++-
 debian/upstream/edam | 18 ++++++++++++++++++
 2 files changed, 20 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index 89a2133..ea8062a 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,6 +1,7 @@
 artemis (16.0.0+dfsg-5) UNRELEASED; urgency=medium
 
-  *
+  [ Steffen Moeller and Jon Ison ]
+  * Introduced EDAM annotation
 
  -- Afif Elghraoui <afif at ghraoui.name>  Wed, 23 Dec 2015 19:38:33 -0800
 
diff --git a/debian/upstream/edam b/debian/upstream/edam
new file mode 100644
index 0000000..1973ccb
--- /dev/null
+++ b/debian/upstream/edam
@@ -0,0 +1,18 @@
+ontology: EDAM (1.13)
+topic:
+  - Genomics
+scopes:
+  - name: summary
+    function:
+     - Genome visualisation
+     - Genome annotation
+    inputs:
+     - data:   Sequence
+       formats: [BAM,FASTA,GFF,EMBL,VCF,BCF]
+    outputs:
+     - data:   Sequence
+       formats: [GFF,EMBL,FASTA,EMBL,GenBank]
+     - data:   Sequence image
+       formats: [PNG,SVG,JPEG]
+     - data:   Feature table
+       formats: [Sequin]

-- 
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