[med-svn] [spades] 02/02: fix more spelling issues

Sascha Steinbiss sascha at steinbiss.name
Sat Feb 6 22:42:14 UTC 2016


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sascha-guest pushed a commit to branch master
in repository spades.

commit 9ff87ac5ba6c3b62cfe3ec27b8ff4252f301f089
Author: Sascha Steinbiss <sascha at steinbiss.name>
Date:   Sat Feb 6 22:40:15 2016 +0000

    fix more spelling issues
---
 debian/patches/0112_spelling.patch | 27 +++++++++++++++++++++++++--
 1 file changed, 25 insertions(+), 2 deletions(-)

diff --git a/debian/patches/0112_spelling.patch b/debian/patches/0112_spelling.patch
index 727256c..553da74 100644
--- a/debian/patches/0112_spelling.patch
+++ b/debian/patches/0112_spelling.patch
@@ -11,6 +11,26 @@ Author: Sascha Steinbiss <sascha at steinbiss.name>
  		if(num_splits.second != 0){
  			size_t edge_ind = vertices_to_split_[indexes.first].edge_ind_ + 1;
  			split_paths.first.push_back(default_paths.first[edge_ind]);
+@@ -298,7 +298,7 @@
+ 
+ 		set<size_t> processed_indices;
+ 		while(num_done_splits < num_splits_.first + num_splits_.second){
+-			TRACE("Splitted index - " << split_index << " , owner - " <<
++			TRACE("Split index - " << split_index << " , owner - " <<
+ 					vertices_to_split_[split_index].owner_path_);
+ 
+ 			size_t opposite_index = IndexFirstOppositeEdge(split_index, processed_indices);
+@@ -418,8 +418,8 @@
+ 		if(!PerformSplitting(range1, range2))
+ 			return SplitResult(graph_);
+ 
+-		TRACE("Splitted spath1 - " << SimplePathWithVerticesToString(graph_, split_paths_.first));
+-		TRACE("Splitted spath2 - " << SimplePathWithVerticesToString(graph_, split_paths_.second));
++		TRACE("Split spath1 - " << SimplePathWithVerticesToString(graph_, split_paths_.first));
++		TRACE("Split spath2 - " << SimplePathWithVerticesToString(graph_, split_paths_.second));
+ 		return SplitResult(graph_, split_paths_.first, split_paths_.second);
+ 	}
+ 
 @@ -445,7 +445,7 @@
  			auto split_res = spaths_splitter.SplitSubpaths(
  					subpath_range(0, bulge->path1().size() - 1),
@@ -44,12 +64,15 @@ Author: Sascha Steinbiss <sascha at steinbiss.name>
                          }
 --- a/src/dipspades/kmer_gluing/equal_sequence_gluer.hpp
 +++ b/src/dipspades/kmer_gluing/equal_sequence_gluer.hpp
-@@ -74,7 +74,7 @@
+@@ -74,9 +74,9 @@
  				pos2 = graph_.length(edge1) - tmp - 1;
  			}
              INFO(pos1 << " " << pos2 << " " << graph_.length(edge1))
 -			TRACE("Edge1 " << graph_.int_id(edge1) << " will be splitted");
 +			TRACE("Edge1 " << graph_.int_id(edge1) << " will be split");
  			pair<EdgeId, EdgeId> split_edges = graph_.SplitEdge(edge1, pos1 + 1);
- 			TRACE("Splitted pair was created");
+-			TRACE("Splitted pair was created");
++			TRACE("Split pair was created");
  			TRACE("New edge1: " << graph_.int_id(split_edges.first) << ", length: " << graph_.length(split_edges.first));
+ 			TRACE("New edge2: " << graph_.int_id(split_edges.second) << ", length: " << graph_.length(split_edges.second));
+ 			edge1 = split_edges.first;

-- 
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