[med-svn] [snap-aligner] 01/01: cme fix dpkg
Michael Crusoe
misterc-guest at moszumanska.debian.org
Wed Feb 24 15:39:39 UTC 2016
This is an automated email from the git hooks/post-receive script.
misterc-guest pushed a commit to branch master
in repository snap-aligner.
commit 27d02bdb4ca8be141197aa5e07a165cb6d754fea
Author: Michael R. Crusoe <crusoe at ucdavis.edu>
Date: Wed Feb 24 07:39:33 2016 -0800
cme fix dpkg
---
debian/control | 12 ++++++------
debian/patches/non-x86-and-kfreebsd | 3 +--
2 files changed, 7 insertions(+), 8 deletions(-)
diff --git a/debian/control b/debian/control
index 980841b..abb33fa 100644
--- a/debian/control
+++ b/debian/control
@@ -1,19 +1,20 @@
Source: snap-aligner
-Section: science
-Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <crusoe at ucdavis.edu>
+Section: science
+Priority: optional
Build-Depends: debhelper (>= 9),
help2man,
zlib1g-dev
-Standards-Version: 3.9.6
+Standards-Version: 3.9.7
Vcs-Browser: http://anonscm.debian.org/cgit/debian-med/snap-aligner.git
-Vcs-Git: git://anonscm.debian.org/debian-med/snap-aligner.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/snap-aligner.git
Homepage: http://snap.cs.berkeley.edu/
Package: snap-aligner
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
Description: Scalable Nucleotide Alignment Program
SNAP is a new sequence aligner that is 3-20x faster and just as accurate as
existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86
@@ -23,4 +24,3 @@ Description: Scalable Nucleotide Alignment Program
larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or
gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting,
duplicate marking, and BAM indexing.
-
diff --git a/debian/patches/non-x86-and-kfreebsd b/debian/patches/non-x86-and-kfreebsd
index 4922804..5c7f6c6 100644
--- a/debian/patches/non-x86-and-kfreebsd
+++ b/debian/patches/non-x86-and-kfreebsd
@@ -1,7 +1,6 @@
Description: Uses more liberal CPP defines to add compatability to kfreebsd &
non-x86 systems
-Author: Michael R. Crusoe <crusoe at ucdavis.edu> and Aaron M. Ucko
- <ucko at debian.org>
+Author: Michael R. Crusoe <crusoe at ucdavis.edu> and Aaron M. Ucko <ucko at debian.org>
--- snap-aligner.orig/SNAPLib/Compat.cpp
+++ snap-aligner/SNAPLib/Compat.cpp
@@ -1015,7 +1015,7 @@
--
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