[med-svn] [ngs-sdk] 13/15: disable tests for Java binding, needing ncbi-lib, not available for now

[Olivier Sallou]

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osallou pushed a commit to branch master
in repository ngs-sdk.

commit 77e95e76c462939500783d16b13d8fe27dfe0744
Author: Olivier Sallou <olivier.sallou at debian.org>
Date:   Mon Jan 4 14:43:54 2016 +0100

    disable tests for Java binding, needing ncbi-lib, not available for now
---
 debian/control | 6 ++++--
 debian/rules   | 5 ++++-
 2 files changed, 8 insertions(+), 3 deletions(-)

diff --git a/debian/control b/debian/control
index 6e25aa3..08f9ee3 100644
--- a/debian/control
+++ b/debian/control
@@ -56,9 +56,11 @@ Description: Next Generation Sequencing language Bindings (development)
  This is the development package.
 
 Package: libngs-java
-Architecture: all
+Architecture: any
 Section: java
-Depends: ${misc:Depends}, ${java:Depends}
+Depends: ${misc:Depends},
+         ${java:Depends},
+         libngs-sdk-dev (= ${binary:Version})
 Recommends: ${java:Recommends}
 Description: Next Generation Sequencing language Bindings (Java bindings)
  NGS is a new, domain-specific API for accessing reads, alignments and
diff --git a/debian/rules b/debian/rules
index 1cd03fa..33dfd8c 100755
--- a/debian/rules
+++ b/debian/rules
@@ -55,7 +55,10 @@ override_dh_auto_build:
 
 override_dh_auto_test:
 	make -C $(DEBPKGNAME)/test
-	CLASSPATH=ngs-java/$(BUILDTYPE)/ngs-java/jar/ngs-java.jar && LD_LIBRARY_PATH=$(SODIR) && make -C ngs-java/examples
+	# Tests of Java binding disabled because need external lib ncbi-vdb,
+	# not available in Debian at this time
+	#CLASSPATH=../$(BUILDTYPE)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples
+	#CLASSPATH=../$(BUILDTYPE)/ngs-java/jar/ngs-java.jar LD_LIBRARY_PATH=../../$(SODIR)/rel/lib:$(LD_LIBRARY_PATH) make -C ngs-java/examples run_all
 
 override_dh_auto_install:
 	d-shlibmove --commit \

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