[med-svn] [scrm] 02/04: Initial packaging

[Kevin Murray]

This is an automated email from the git hooks/post-receive script.

daube-guest pushed a commit to branch master
in repository scrm.

commit 1608a09ddd7a8f7075afb18e88a253965894959b
Author: Kevin Murray <spam at kdmurray.id.au>
Date:   Fri Jan 8 12:10:34 2016 +1100

    Initial packaging
---
 debian/changelog     |  5 +++++
 debian/compat        |  1 +
 debian/control       | 25 +++++++++++++++++++++++++
 debian/copyright     | 48 ++++++++++++++++++++++++++++++++++++++++++++++++
 debian/docs          |  2 ++
 debian/rules         | 11 +++++++++++
 debian/source/format |  1 +
 7 files changed, 93 insertions(+)

diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..37797d6
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+scrm (1.6.1-1) unstable; urgency=low
+
+  * Initial release (Closes: #809972)
+
+ -- Kevin Murray <spam at kdmurray.id.au>  Fri, 08 Jan 2016 12:02:44 +1100
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..042c8a6
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,25 @@
+Source: scrm
+Section: science
+Priority: optional
+Maintainer: Kevin Murray <spam at kdmurray.id.au>
+Build-Depends: debhelper (>= 9),
+               dh-autoreconf,
+               libcppunit-dev
+Standards-Version: 3.9.6
+Homepage: https://github.com/scrm/scrm
+Vcs-Git: git://anonscm.debian.org/debian-med/scrm.git
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/scrm.git/
+
+Package: scrm
+Architecture: any
+Depends: ${shlibs:Depends},
+         ${misc:Depends}
+Description: simulator of evolution of genetic sequences
+ scrm simulates the evolution of genetic sequences.
+
+ It takes a neutral evolutionary model as input, and generates random sequences
+ that evolved under the model. As coalescent simulator, it traces the ancestry
+ of the sampled sequences backwards in time and is therefore extremely
+ efficient. Compared to other coalescent simulators, it can simulate
+ chromosome-scale sequences without a measureable reduction of genetic linkage
+ between different sites.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..88600ec
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,48 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: scrm
+Source: https://github.com/scrm/scrm
+
+Files: *
+Copyright: 2013, 2014 Paul R. Staab, Sha (Joe) Zhu, Dirk Metzler and Gerton Lunter
+License: GPL-3+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <https://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+
+
+Files: debian/*
+Copyright: 2016 Kevin Murray <spam at kdmurray.id.au>
+License: Expat
+ Permission is hereby granted, free of charge, to any person obtaining
+ a copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, sublicense, and/or sell copies of the Software, and to
+ permit persons to whom the Software is furnished to do so, subject to
+ the following conditions:
+ .
+ The above copyright notice and this permission notice shall be
+ included in all copies or substantial portions of the Software.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
+ BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
+ ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
+ CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+ SOFTWARE.
+
+
diff --git a/debian/docs b/debian/docs
new file mode 100644
index 0000000..da4bc20
--- /dev/null
+++ b/debian/docs
@@ -0,0 +1,2 @@
+NEWS.md
+README.md
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..1642776
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,11 @@
+#!/usr/bin/make -f
+
+export DH_VERBOSE = 1
+
+DPKG_EXPORT_BUILDFLAGS = 1
+include /usr/share/dpkg/default.mk
+
+# main packaging script based on dh7 syntax
+%:
+	dh $@ --parallel --with autoreconf
+
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/scrm.git