[med-svn] r21060 - trunk/packages/fastdnaml/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-01-09 17:29:56 +0000 (Sat, 09 Jan 2016)
New Revision: 21060

Modified:
   trunk/packages/fastdnaml/trunk/debian/changelog
   trunk/packages/fastdnaml/trunk/debian/copyright
Log:
DEP5


Modified: trunk/packages/fastdnaml/trunk/debian/changelog
===================================================================
--- trunk/packages/fastdnaml/trunk/debian/changelog	2016-01-09 17:18:30 UTC (rev 21059)
+++ trunk/packages/fastdnaml/trunk/debian/changelog	2016-01-09 17:29:56 UTC (rev 21060)
@@ -3,6 +3,7 @@
   * debian/upstream: Add citation information
   * cme fix dpkg-control
   * debhelper 9
+  * DEP5
 
  -- Andreas Tille <tille at debian.org>  Fri, 27 Apr 2012 09:29:55 +0200
 

Modified: trunk/packages/fastdnaml/trunk/debian/copyright
===================================================================
--- trunk/packages/fastdnaml/trunk/debian/copyright	2016-01-09 17:18:30 UTC (rev 21059)
+++ trunk/packages/fastdnaml/trunk/debian/copyright	2016-01-09 17:29:56 UTC (rev 21060)
@@ -1,50 +1,31 @@
-This package was debianized by Andreas Tille <tille at debian.org> on
-Mon, 29 Oct 2001 22:34:09 +0100.
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: fastDNAml
+Upstream-Contact: Gary J. Olsen <gary at phylo.life.uiuc.edu>
+Source: Seems not to be available any more online
 
-It was downloaded from http://geta.life.uiuc.edu/~gary/programs/fastDNAml/
-Homepage: http://geta.life.uiuc.edu/~gary/programs/fastDNAml.html
-   Note: This Homepage vanished and seems to have no replacement
+Files: *
+Copyright: 1998-2000 Gary J. Olsen <gary at phylo.life.uiuc.edu>,
+                     Hideo Matsuda <matsuda at mcs.anl.gov>,
+                     Ray Hagstrom <hagstrom at mcs.anl.gov>,
+                     Ross Overbeek <overbeek at mcs.anl.gov>
+License: GPL-2+
+Comment: fastDNAml is based in part on the program dnaml by Joseph Felsenstein.
 
-Upstream Authors: "Gary J. Olsen" <gary at phylo.life.uiuc.edu>,
-        Hideo Matsuda <matsuda at mcs.anl.gov>,
-        Ray Hagstrom <hagstrom at mcs.anl.gov>,
-        Ross Overbeek <overbeek at mcs.anl.gov>
+Files: debian/*
+Copyright: 2001-2016 Andreas Tille <tille at debian.org>
+License: GPL-2+
 
+License: GPL-2+
+ This program is free software; you may redistribute it and/or modify it
+ under the terms of the GNU General Public License as published by the Free
+ Software Foundation; either version 2 of the License, or (at your option)
+ any later version.
+ .
+ This program is distributed in the hope that it will be useful, but
+ WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
+ or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
+ for more details.
+ .
+ On Debian systems, the complete text of the GNU General Public
+ Licence can be found in /usr/share/common-licenses/GPL-2 file.
 
-Copyright (C) 1998, 1999, 2000 by Gary J. Olsen
-
-License: GPL (since January 1999)
-
-
-This program is free software; you may redistribute it and/or modify it
-under the terms of the GNU General Public License as published by the Free
-Software Foundation; either version 2 of the License, or (at your option)
-any later version.
-
-This program is distributed in the hope that it will be useful, but
-WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
-or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License
-for more details.
-
-On Debian systems, the complete text of the GNU General Public
-Licence can be found in /usr/share/common-licenses/GPL file.
-
-fastDNAml is based in part on the program dnaml by Joseph Felsenstein.
-
-Copyright notice from dnaml:
-
-   version 3.3. (c) Copyright 1986, 1990 by the University of Washington
-   and Joseph Felsenstein.  Written by Joseph Felsenstein.  Permission is
-   granted to copy and use this program provided no fee is charged for it
-   and provided that this copyright notice is not removed.
-
-When publishing work that based on results from fastDNAml please cite:
-
-   Felsenstein, J.  1981.  Evolutionary trees from DNA sequences:
-   A maximum likelihood approach.  J. Mol. Evol. 17: 368-376.
-
-and
-
-   Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R.  1994.
-   fastDNAml:  A tool for construction of phylogenetic trees of DNA
-   sequences using maximum likelihood.  Comput. Appl. Biosci. 10: 41-48.