[med-svn] [fastqc] annotated tag debian/0.11.4+dfsg-3 created (now a609cb0)

[Olivier Sallou]

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osallou pushed a change to annotated tag debian/0.11.4+dfsg-3
in repository fastqc.

        at  a609cb0   (tag)
   tagging  31c1e2ebdac0d1fab94848f04c288eac0d86e702 (commit)
  replaces  upstream/0.11.3+dfsg
 tagged by  Olivier Sallou
        on  Mon Jan 18 10:46:04 2016 +0100

- Log -----------------------------------------------------------------
fastqc Debian release 0.11.4+dfsg-3

Andreas Tille (27):
      Merge tag 'upstream/0.11.3+dfsg'
      Re-add debian/ dir after creating upstream branch
      Move Vcs to Git
      Adapt patches to new upstream version
      Refresh patches
      Try to base the build on ant rather than make (but failed)
      New Build-Depends: libjhdf5-java
      Imported Upstream version 0.11.4+dfsg
      Merge tag 'upstream/0.11.4+dfsg'
      New upstream version
      Add missing Build-Depends ant, explicit location of /usr/share/java/commons-math3.jar
      Add libsis-hdf5-java Build-Depends (package is in new queue)
      Fix typo
      Create and install fastqc.jar
      Add DEP3 header
      DEP5 issue solved by proper sequence of paragraphs
      Fix spelling
      Adapt jar path
      Install files into proper location
      replace debian/menu by debian/fastqc.desktop
      Upload to unstable
      Add explicit Depends: default-jre | java7-runtime
      Build-Depends: libhtsjdk-java | libsam-java and try to enable htsjdk.jar in Build system
      Remove deactivated patch
      Path to samtools changed when switching from libsam-java to libhtsjdk-java
      It seems there is no chance to keep libsam-java usable (for instance for backports)
      Let ${java:Depends} do its automatically dependency generating job

Emmanuel Bourg (2):
      Fixed the path to hdf5.jar
      Exclude the .pc directory from the compilation path

Olivier Sallou (2):
      fix htsjdk import
      upload release using htsjdk

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