[med-svn] [salmon] 01/04: drop kseq.h

[Michael Crusoe]

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misterc-guest pushed a commit to branch master
in repository salmon.

commit d9b7c0dd36718d06989bce3bb1a8d4ed0fbcb9e7
Author: Michael R. Crusoe <crusoe at ucdavis.edu>
Date:   Sat Jan 30 08:31:55 2016 -0800

    drop kseq.h
---
 debian/copyright | 27 ++++++++++++++++++++++++++-
 1 file changed, 26 insertions(+), 1 deletion(-)

diff --git a/debian/copyright b/debian/copyright
index 90a906b..f9d8de1 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -6,12 +6,20 @@ Files-Excluded: doc/build/*
  src/SalmonQuantify.cpp.bak
  include/eigen3
  include/obsolete
+ include/kseq.h
+ include/posix.h
+ include/tensemble/Tree.h.backup.h 
+ src/posix.cc
  cmake/Modules/FindTBB.cmake
+ scripts/cpld.bash
 
 Files: *
 Copyright: © 2015 The Salmon Authors
-           (c) 2013, 2014 Rob Patro <robp at cs.cmu.edu>
+           (c) 2013, 2014, 2015 Rob Patro <robp at cs.cmu.edu>
            2013 Adam Roberts
+           (C) 2012, Rongkai Xia <shinekaixia at gmail.com>
+           (C) 2004, Wong Chi Kwong
+           (C) 1997 Makoto Matsumoto and Takuji Nishimura
 License: GPL-3+
 
 Files: debian/*
@@ -20,6 +28,7 @@ License: GPL-3+
 
 Files: cmake/Modules/FindJemalloc.cmake
        include/VersionChecker.hpp
+       src/VersionChecker.cpp
 Copyright: (c)      2014 Thomas Heller
            (c) 2007-2012 Hartmut Kaiser
            (c) 2010-2011 Matt Anderson
@@ -28,19 +37,35 @@ Copyright: (c)      2014 Thomas Heller
 License: BSL-1.0
 
 Files: include/btree*.h
+       include/safe_btree*.h
 Copyright: 2013 Google Inc.
 License: apache-2.0
 
 Files: include/ezETAProgressBar.hpp
        include/fastapprox.h
        include/format.h
+       src/bwtindex.c
+       src/format.cc
+       src/sais.c
 Copyright: 2011, 2012 Remik Ziemlinski
            2011, 2012 Paul Mineiro <paul at mineiro.com>
            (c) 2012 - 2015, Victor Zverovich
+           (c) 2008 Genome Research Ltd (GRL)
+           (c) 2008 Yuta Mori All Rights Reserved
 License: Expat
 
+Files: src/QSufSort.c
+Copyright: 1999, N. Jesper Larsson <jesper at cs.lth.se>
+License: other
+ This software may be used freely for any purpose. However, when distributed,
+ the original source must be clearly stated, and, when the source code is
+ distributed, the copyright notice must be retained and any alterations in
+ the code must be clearly marked. No warranty is given regarding the quality
+ of this software
+
 Files: include/atomicops.h
        include/concurrentqueue.h
+       include/readerwriterqueue.h
 Copyright: ©2013 Cameron Desrochers
 License: BSD-cameron-descrochers
  Redistribution and use in source and binary forms, with or without

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