[med-svn] [gdcm] branch master updated (fe70073 -> f97c88e)

[Gert Wollny]

This is an automated email from the git hooks/post-receive script.

gert-guest pushed a change to branch master
in repository gdcm.

      from  fe70073   Set for release
       new  600fd4e   Imported Upstream version 2.6.3
       new  ba5b763   Merge tag 'upstream/2.6.3'
       new  dc5472b   New upstream version
       new  10223c2   Update vtk-docu patch
       new  4faf8f9   Update 06 patch
       new  d382027   Update docbook dependency
       new  574744f   Remove the micro version of the pdf file
       new  a1fee8e   Prepare release
       new  f97c88e   Set back to unreleased, because can't be build right now.

The 9 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .travis.yml                                        | 62 +++++++++++++++++-----
 AUTHORS                                            |  2 +-
 CMake/FindJavaProperties.cmake                     |  2 +-
 CMake/FindOpenJPEG.cmake                           |  1 +
 CMake/FindUUID.cmake                               |  8 +--
 CMake/UseCSharp.cmake                              |  9 +++-
 CMake/UseJavaTest.cmake                            | 14 +++--
 CMake/UsePythonTest.cmake                          | 27 ++++++++--
 CMakeLists.txt                                     |  2 +-
 Copyright.txt                                      |  2 +-
 Examples/Csharp/DecompressImage.cs                 |  5 ++
 Examples/Java/CMakeLists.txt                       | 10 ++--
 Examples/Python/ConvertNumpy.py                    |  4 +-
 README.txt                                         | 20 +++----
 Source/Common/CMakeLists.txt                       |  6 +++
 Source/Common/gdcmBoxRegion.cxx                    |  2 +-
 Source/Common/gdcmConfigure.h.in                   |  1 +
 Source/Common/gdcmDummyValueGenerator.cxx          |  2 +-
 Source/Common/gdcmSystem.cxx                       | 57 ++------------------
 .../gdcmDataSet.h                                  | 19 ++++---
 .../DataStructureAndEncodingDefinition/gdcmVR.cxx  |  9 ++--
 Source/DataStructureAndEncodingDefinition/gdcmVR.h | 15 +++++-
 .../MediaStorageAndFileFormat/gdcmImageHelper.cxx  |  4 +-
 .../MediaStorageAndFileFormat/gdcmJPEGLSCodec.cxx  |  2 +-
 Source/MediaStorageAndFileFormat/gdcmJSON.cxx      | 32 +++++++----
 Source/MediaStorageAndFileFormat/gdcmRLECodec.cxx  |  2 +-
 Source/MediaStorageAndFileFormat/gdcmSegment.cxx   |  2 +-
 .../MediaStorageAndFileFormat/gdcmSerieHelper.cxx  |  2 +-
 .../MediaStorageAndFileFormat/gdcmStringFilter.cxx |  1 +
 .../gdcmSurfaceReader.cxx                          |  2 +-
 .../MediaStorageAndFileFormat/gdcmXMLPrinter.cxx   |  1 +
 Testing/Source/Common/Cxx/TestByteSwap.cxx         |  2 +-
 Testing/Source/Common/Cxx/TestSystem1.cxx          |  2 +-
 Testing/Source/Common/Python/CMakeLists.txt        |  8 ++-
 Testing/Source/Common/Python/TestDirectory.py      |  2 +-
 Testing/Source/Common/Python/TestTesting.py        |  2 +-
 .../Java/CMakeLists.txt                            | 11 ++--
 .../Python/CMakeLists.txt                          |  7 ++-
 .../Python/TestReader.py                           | 14 ++---
 .../Python/TestTag.py                              |  2 +-
 .../Cxx/TestPhotometricInterpretation.cxx          |  2 +-
 .../Python/CMakeLists.txt                          | 23 +++++---
 .../Python/TestAnonymizer.py                       | 22 ++++----
 .../Python/TestDCMTKMD5.py                         |  8 +--
 .../Python/TestIPPSorter.py                        |  2 +-
 .../Python/TestImageReader.py                      |  8 +--
 .../Python/TestKakaduDecompressionMD5.py           | 10 ++--
 .../Python/TestModifyFields.py                     | 14 ++---
 .../Python/TestOrientation.py                      | 10 ++--
 .../Python/TestPythonFilter.py                     | 12 ++---
 .../Python/TestStringFilter.py                     | 12 ++---
 .../Cxx/TestFindPatientRootQuery.cxx               |  2 +-
 .../Cxx/TestFindStudyRootQuery.cxx                 |  2 +-
 Utilities/VTK/CMakeLists.txt                       |  6 ++-
 .../VTK/Testing/Python/TestvtkGDCMImageWriter.py   |  2 +-
 .../Python/TestvtkGDCMThreadedImageReader.py       |  6 +--
 .../Python/TestvtkGDCMThreadedImageReader2.py      |  2 +-
 Utilities/VTK/vtkGDCMThreadedImageReader.cxx       |  8 +--
 Utilities/doxygen/CMakeLists.txt                   | 35 +++++++++++-
 Utilities/doxygen/man/gdcm2pnm.xml                 |  2 +-
 Utilities/doxygen/man/gdcm2vtk.xml                 |  2 +-
 Utilities/doxygen/man/gdcmanon.xml                 |  2 +-
 Utilities/doxygen/man/gdcmconv.xml                 |  2 +-
 Utilities/doxygen/man/gdcmdiff.xml                 |  2 +-
 Utilities/doxygen/man/gdcmdump.xml                 |  2 +-
 Utilities/doxygen/man/gdcmgendir.xml               |  2 +-
 Utilities/doxygen/man/gdcmimg.xml                  |  2 +-
 Utilities/doxygen/man/gdcminfo.xml                 |  2 +-
 Utilities/doxygen/man/gdcmpap3.xml                 |  2 +-
 Utilities/doxygen/man/gdcmpdf.xml                  |  2 +-
 Utilities/doxygen/man/gdcmraw.xml                  |  2 +-
 Utilities/doxygen/man/gdcmscanner.xml              |  2 +-
 Utilities/doxygen/man/gdcmscu.xml                  |  2 +-
 Utilities/doxygen/man/gdcmtar.xml                  |  2 +-
 Utilities/doxygen/man/gdcmviewer.xml               |  2 +-
 Utilities/doxygen/man/gdcmxml.xml                  |  2 +-
 Utilities/doxygen/vtk/CMakeLists.txt               |  8 ++-
 Utilities/gdcmopenjpeg-v1/libopenjpeg/t2.c         |  6 ++-
 Utilities/gdcmzlib/gzio.c                          |  4 +-
 Wrapping/Csharp/gdcm.i                             |  6 +++
 Wrapping/Java/CMakeLists.txt                       | 15 +++---
 Wrapping/Java/gdcm.i                               | 17 ++++++
 Wrapping/Python/CMakeLists.txt                     |  7 +++
 Wrapping/Python/TestWrap.py                        | 15 ++++++
 Wrapping/Python/gdcmPythonFilter.h                 |  2 +-
 Wrapping/Python/gdcmswig.i                         | 13 ++++-
 appveyor.yml                                       | 52 ++++++++++++------
 debian/changelog                                   | 10 ++++
 debian/control                                     |  2 +-
 debian/gdcm-doc.doc-base                           |  2 +-
 debian/gdcm-doc.install                            |  2 +-
 debian/patches/03_linkvtkdoc.patch                 | 28 +++-------
 .../06_dcm_group2_buggyfiles_fallback.patch        | 46 ++++++++++++++++
 debian/patches/series                              |  1 +
 94 files changed, 536 insertions(+), 297 deletions(-)
 create mode 100644 debian/patches/06_dcm_group2_buggyfiles_fallback.patch

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