[med-svn] [rsem] branch master updated (d66fb92 -> 392a448)
Michael Crusoe
misterc-guest at moszumanska.debian.org
Sun Jan 31 11:33:21 UTC 2016
This is an automated email from the git hooks/post-receive script.
misterc-guest pushed a change to branch master
in repository rsem.
from d66fb92 Upload to unstable
new 421d375 fix build clean loop; VCS URL
new 1e2dc5a Imported Upstream version 1.2.26+dfsg
new c6a02ec Merge tag 'upstream/1.2.26+dfsg'
new 392a448 bump version
The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
EBSeq/Makefile | 2 +-
EBSeq/install | 15 +-
EM.cpp | 13 +-
GTFItem.h | 270 ++++++++++++++++++++---------------
Gibbs.cpp | 63 ++++----
README.md | 241 ++++++++++++++++++++++---------
Transcript.h | 41 ++++--
WHAT_IS_NEW | 26 ++++
WriteResults.h | 27 +++-
calcCI.cpp | 92 ++++++++----
debian/changelog | 6 +
debian/control | 5 +-
debian/patches/series | 1 +
debian/patches/spelling | 49 +++++++
debian/rules | 4 +
extractRef.cpp | 52 +++++--
rsem-calculate-expression | 36 ++++-
rsem-gen-transcript-plots | 11 +-
rsem-gff3-to-gtf | 105 ++++++++++++++
rsem-plot-model | 34 ++++-
rsem-prepare-reference | 53 +++++--
rsem-refseq-extract-primary-assembly | 18 +++
rsem-run-ebseq | 8 +-
rsem_perl_utils.pm | 8 +-
24 files changed, 860 insertions(+), 320 deletions(-)
create mode 100644 debian/patches/spelling
create mode 100755 rsem-gff3-to-gtf
create mode 100755 rsem-refseq-extract-primary-assembly
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/rsem.git
More information about the debian-med-commit
mailing list