[med-svn] r22371 - in trunk/packages/rostlab/rate4site/trunk/debian: . tests

[Tatiana Malygina]

Author: latticetower-guest
Date: 2016-07-05 12:30:22 +0000 (Tue, 05 Jul 2016)
New Revision: 22371

Added:
   trunk/packages/rostlab/rate4site/trunk/debian/README.test
   trunk/packages/rostlab/rate4site/trunk/debian/docs
Modified:
   trunk/packages/rostlab/rate4site/trunk/debian/changelog
   trunk/packages/rostlab/rate4site/trunk/debian/tests/installation-test
Log:
add debian/README.test, debian/docs, fix in testsuite

Added: trunk/packages/rostlab/rate4site/trunk/debian/README.test
===================================================================
--- trunk/packages/rostlab/rate4site/trunk/debian/README.test	                        (rev 0)
+++ trunk/packages/rostlab/rate4site/trunk/debian/README.test	2016-07-05 12:30:22 UTC (rev 22371)
@@ -0,0 +1,16 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by executing
+
+    sh installation-test
+
+in order to confirm its integrity.
+
+To test manually, provide multiple sequence alignment file in one of supported 
+formats and run like this:
+
+    rate4site -s <your alignment file>
+
+Refer to `man rate4site` to see other available parameters and list of 
+supported file formats.

Modified: trunk/packages/rostlab/rate4site/trunk/debian/changelog
===================================================================
--- trunk/packages/rostlab/rate4site/trunk/debian/changelog	2016-07-05 11:15:25 UTC (rev 22370)
+++ trunk/packages/rostlab/rate4site/trunk/debian/changelog	2016-07-05 12:30:22 UTC (rev 22371)
@@ -3,6 +3,7 @@
   * Team upload.
   * Add simple testsuite
   * cme fix dpkg-control
+  * add debian/README.test, debian/docs, fix in testsuite
 
  -- Tatiana Malygina <merlettaia at gmail.com>  Mon, 27 Jun 2016 19:02:50 +0300
 

Added: trunk/packages/rostlab/rate4site/trunk/debian/docs
===================================================================
--- trunk/packages/rostlab/rate4site/trunk/debian/docs	                        (rev 0)
+++ trunk/packages/rostlab/rate4site/trunk/debian/docs	2016-07-05 12:30:22 UTC (rev 22371)
@@ -0,0 +1,2 @@
+debian/README.test
+debian/tests/installation-test

Modified: trunk/packages/rostlab/rate4site/trunk/debian/tests/installation-test
===================================================================
--- trunk/packages/rostlab/rate4site/trunk/debian/tests/installation-test	2016-07-05 11:15:25 UTC (rev 22370)
+++ trunk/packages/rostlab/rate4site/trunk/debian/tests/installation-test	2016-07-05 12:30:22 UTC (rev 22371)
@@ -13,13 +13,6 @@
 
 cd $ADTTMP
 
-#cp -a /usr/share/doc/${pkg}/examples/* .
-find . -type f -name "*.gz" -exec gunzip \{\} \;
-for lnk in `find . -type l -name "*.gz"` ; do
-    ln -s `basename $(readlink $lnk) .gz` `echo $lnk | sed 's/\.gz$//'`
-    rm $lnk
-done
-
 cat <<EOF > msa.fasta
 >string1
 CAPTIA-N