[med-svn] [htsjdk] 07/10: fix copyright

[Vincent Danjean]

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vdanjean pushed a commit to branch master
in repository htsjdk.

commit cb3c60062adf5e91c354c9f70a84ec786944244e
Author: Vincent Danjean <Vincent.Danjean at ens-lyon.org>
Date:   Wed Jul 6 01:38:46 2016 +0200

    fix copyright
---
 debian/copyright | 66 ++++++++++++++++++++++++++++----------------------------
 1 file changed, 33 insertions(+), 33 deletions(-)

diff --git a/debian/copyright b/debian/copyright
index 975d1cf..e57981e 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -8,19 +8,19 @@ Copyright: 2009-2015, The Broad Institute
 License: MIT
 
 Files:
- src/java/htsjdk/samtools/SAMFlag.java
- src/tests/java/htsjdk/samtools/SAMFlagTest.java
- src/tests/java/htsjdk/samtools/SAMSequenceDictionaryTest.java
+ src/main/java/htsjdk/samtools/SAMFlag.java
+ src/test/java/htsjdk/samtools/SAMFlagTest.java
+ src/test/java/htsjdk/samtools/SAMSequenceDictionaryTest.java
 Copyright: 2015 Pierre Lindenbaum
 License: MIT
 
-Files: src/java/htsjdk/tribble/util/popgen/HardyWeinbergCalculation.java
+Files: src/main/java/htsjdk/tribble/util/popgen/HardyWeinbergCalculation.java
 Copyright:
   2003, Jan Wigginton, Goncalo Abecasis (goncalo at umich.edu)
   2004, 2009, The Broad Institute
 License: MIT
 
-Files: src/java/htsjdk/samtools/util/DateParser.java
+Files: src/main/java/htsjdk/samtools/util/DateParser.java
 Copyright: 2000 MIT, INRIA and Keio
 License: W3C-Software
 
@@ -30,42 +30,42 @@ License: Apache-2.0
 
 Files:
  src/c/inteldeflater/IntelDeflater.c
- src/java/htsjdk/samtools/util/zip/IntelDeflater.java
- src/java/htsjdk/samtools/util/zip/ZStreamRef.java
+ src/main/java/htsjdk/samtools/util/zip/IntelDeflater.java
+ src/main/java/htsjdk/samtools/util/zip/ZStreamRef.java
 Copyright: (c) 1996, 1996, 2009, 2010, Oracle and/or its affiliates. All rights reserved.
 License: GPL-2 with Classpath exception
 
 Files:
- src/java/htsjdk/samtools/CRAM*.java
- src/java/htsjdk/samtools/cram/*
+ src/main/java/htsjdk/samtools/CRAM*.java
+ src/main/java/htsjdk/samtools/cram/*
 Copyright: 2013, EMBL-EBI
 License: Apache-2.0
 
 Files:
- src/java/htsjdk/samtools/seekablestream/SeekableFileStream.java
- src/java/htsjdk/samtools/seekablestream/SeekableFTPStream.java
- src/java/htsjdk/samtools/seekablestream/SeekableFTPStreamHelper.java
- src/java/htsjdk/samtools/util/ftp/FTPClient.java
- src/java/htsjdk/samtools/util/ftp/FTPReply.java
- src/java/htsjdk/samtools/util/ftp/FTPStream.java
- src/java/htsjdk/samtools/util/ftp/FTPUtils.java
- src/java/htsjdk/tribble/AbstractFeatureReader.java
- src/java/htsjdk/tribble/AsciiFeatureCodec.java
- src/java/htsjdk/tribble/CloseableTribbleIterator.java
- src/java/htsjdk/tribble/FeatureCodec.java
- src/java/htsjdk/tribble/FeatureReader.java
- src/java/htsjdk/tribble/index/AbstractIndex.java
- src/java/htsjdk/tribble/index/interval/Interval.java
- src/java/htsjdk/tribble/index/interval/IntervalIndexCreator.java
- src/java/htsjdk/tribble/index/interval/IntervalTree.java
- src/java/htsjdk/tribble/index/interval/IntervalTreeIndex.java
- src/java/htsjdk/tribble/index/linear/LinearIndex.java
- src/java/htsjdk/tribble/readers/AsciiLineReader.java
- src/java/htsjdk/tribble/readers/PositionalBufferedStream.java
- src/java/htsjdk/tribble/util/HTTPHelper.java
- src/java/htsjdk/tribble/util/URLHelper.java
- src/tests/java/htsjdk/tribble/index/linear/LinearIndexTest.java
- src/tests/java/htsjdk/tribble/index/interval/IntervalTreeTest.java
+ src/main/java/htsjdk/samtools/seekablestream/SeekableFileStream.java
+ src/main/java/htsjdk/samtools/seekablestream/SeekableFTPStream.java
+ src/main/java/htsjdk/samtools/seekablestream/SeekableFTPStreamHelper.java
+ src/main/java/htsjdk/samtools/util/ftp/FTPClient.java
+ src/main/java/htsjdk/samtools/util/ftp/FTPReply.java
+ src/main/java/htsjdk/samtools/util/ftp/FTPStream.java
+ src/main/java/htsjdk/samtools/util/ftp/FTPUtils.java
+ src/main/java/htsjdk/tribble/AbstractFeatureReader.java
+ src/main/java/htsjdk/tribble/AsciiFeatureCodec.java
+ src/main/java/htsjdk/tribble/CloseableTribbleIterator.java
+ src/main/java/htsjdk/tribble/FeatureCodec.java
+ src/main/java/htsjdk/tribble/FeatureReader.java
+ src/main/java/htsjdk/tribble/index/AbstractIndex.java
+ src/main/java/htsjdk/tribble/index/interval/Interval.java
+ src/main/java/htsjdk/tribble/index/interval/IntervalIndexCreator.java
+ src/main/java/htsjdk/tribble/index/interval/IntervalTree.java
+ src/main/java/htsjdk/tribble/index/interval/IntervalTreeIndex.java
+ src/main/java/htsjdk/tribble/index/linear/LinearIndex.java
+ src/main/java/htsjdk/tribble/readers/AsciiLineReader.java
+ src/main/java/htsjdk/tribble/readers/PositionalBufferedStream.java
+ src/main/java/htsjdk/tribble/util/HTTPHelper.java
+ src/main/java/htsjdk/tribble/util/URLHelper.java
+ src/test/java/htsjdk/tribble/index/linear/LinearIndexTest.java
+ src/test/java/htsjdk/tribble/index/interval/IntervalTreeTest.java
 Copyright:
  2007-2010, The Broad Institute, Inc. and the Massachusetts Institute of Technology
  2007-2011, The Broad Institute of MIT and Harvard.

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