[med-svn] r22421 - in trunk/packages/R: . r-cran-irlba r-cran-irlba/trunk r-cran-irlba/trunk/debian r-cran-irlba/trunk/debian/source r-cran-irlba/trunk/debian/tests
Andreas Tille
tille at moszumanska.debian.org
Thu Jul 7 12:48:45 UTC 2016
Author: tille
Date: 2016-07-07 12:48:42 +0000 (Thu, 07 Jul 2016)
New Revision: 22421
Added:
trunk/packages/R/r-cran-irlba/
trunk/packages/R/r-cran-irlba/trunk/
trunk/packages/R/r-cran-irlba/trunk/debian/
trunk/packages/R/r-cran-irlba/trunk/debian/README.test
trunk/packages/R/r-cran-irlba/trunk/debian/changelog
trunk/packages/R/r-cran-irlba/trunk/debian/compat
trunk/packages/R/r-cran-irlba/trunk/debian/control
trunk/packages/R/r-cran-irlba/trunk/debian/copyright
trunk/packages/R/r-cran-irlba/trunk/debian/docs
trunk/packages/R/r-cran-irlba/trunk/debian/examples
trunk/packages/R/r-cran-irlba/trunk/debian/rules
trunk/packages/R/r-cran-irlba/trunk/debian/source/
trunk/packages/R/r-cran-irlba/trunk/debian/source/format
trunk/packages/R/r-cran-irlba/trunk/debian/tests/
trunk/packages/R/r-cran-irlba/trunk/debian/tests/control
trunk/packages/R/r-cran-irlba/trunk/debian/tests/run-unit-test
trunk/packages/R/r-cran-irlba/trunk/debian/watch
Log:
Inject r-cran-irlba
Added: trunk/packages/R/r-cran-irlba/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/README.test (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/README.test 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,8 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+To run the unit tests provided by the package you can do
+
+ sh run-unit-test
+
+in this directory.
Added: trunk/packages/R/r-cran-irlba/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/changelog (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/changelog 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,5 @@
+r-cran-irlba (2.0.0-1) unstable; urgency=low
+
+ * Initial release (closes: #830217)
+
+ -- Andreas Tille <tille at debian.org> Thu, 07 Jul 2016 14:41:08 +0200
Added: trunk/packages/R/r-cran-irlba/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/compat (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/compat 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1 @@
+9
Added: trunk/packages/R/r-cran-irlba/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/control (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/control 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,23 @@
+Source: r-cran-irlba
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Andreas Tille <tille at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ cdbs,
+ r-base-dev,
+ r-cran-matrix
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-irlba/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-irlba/trunk/
+Homepage: https://cran.r-project.org/web/packages/irlba
+
+Package: r-cran-irlba
+Architecture: all
+Depends: ${misc:Depends},
+ ${R:Depends},
+ r-cran-matrix
+Description: GNU R fast truncated SVD, PCA and symmetric eigendecomposition
+ This GNU R package provides Fast and memory efficient methods for
+ truncated singular and eigenvalue decompositions and principal component
+ analysis of large sparse or dense matrices.
Added: trunk/packages/R/r-cran-irlba/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/copyright (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/copyright 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,29 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: irlba
+Upstream-Contact: Bryan W. Lewis <blewis at illposed.net>
+Source: https://cran.r-project.org/web/packages/irlba
+
+Files: *
+Copyright: 2010-2015 Bryan W. Lewis <blewis at illposed.net>,
+ Lothar Reichel
+License: GPL-2+
+Comment: The download page specifies
+ GPL-2 | GPL-3 [expanded from: GPL] and links to a GPL-2+ text
+
+Files: debian/*
+Copyright: 2016 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ On Debian systems, the complete text of the GNU General Public
+ License can be found in `/usr/share/common-licenses/GPL-2'.
Added: trunk/packages/R/r-cran-irlba/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/docs (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/docs 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,3 @@
+debian/README.test
+debian/tests/run-unit-test
+tests
Added: trunk/packages/R/r-cran-irlba/trunk/debian/examples
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/examples (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/examples 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1 @@
+vignettes
Added: trunk/packages/R/r-cran-irlba/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/rules (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/rules 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,3 @@
+#!/usr/bin/make -f
+
+include /usr/share/R/debian/r-cran.mk
Property changes on: trunk/packages/R/r-cran-irlba/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
+ *
Added: trunk/packages/R/r-cran-irlba/trunk/debian/source/format
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/source/format (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/source/format 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1 @@
+3.0 (quilt)
Added: trunk/packages/R/r-cran-irlba/trunk/debian/tests/control
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/tests/control (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/tests/control 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @
+Restrictions: allow-stderr
Added: trunk/packages/R/r-cran-irlba/trunk/debian/tests/run-unit-test
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/tests/run-unit-test (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/tests/run-unit-test 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,22 @@
+#!/bin/sh -e
+oname=irlba
+pkg=r-cran-`echo $oname | tr '[A-Z]' '[a-z]'`
+
+if [ "$ADTTMP" = "" ] ; then
+ ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+ trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM
+fi
+cd $ADTTMP
+cp /usr/share/doc/$pkg/examples/vignettes/* $ADTTMP
+cp /usr/share/doc/$pkg/tests/* $ADTTMP
+find . -name "*.gz" -exec gunzip \{\} \;
+for rnw in `ls *.[rRS]nw` ; do
+rfile=`echo $rnw | sed 's/\.[rRS]nw/.R/'`
+R --no-save <<EOT
+ Stangle("$rnw")
+ source("$rfile", echo=TRUE)
+EOT
+ echo "$rnw passed"
+done
+
+LC_ALL=C R --no-save < test.R
Added: trunk/packages/R/r-cran-irlba/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-cran-irlba/trunk/debian/watch (rev 0)
+++ trunk/packages/R/r-cran-irlba/trunk/debian/watch 2016-07-07 12:48:42 UTC (rev 22421)
@@ -0,0 +1,2 @@
+version=3
+http://cran.r-project.org/src/contrib/irlba_([-\d.]*)\.tar\.gz
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