[med-svn] [sra-sdk] 02/02: do not use static lib
Andreas Tille
tille at debian.org
Fri Jul 22 21:30:48 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository sra-sdk.
commit 472ba0809a453ddf93169a9db01ae5f4451ec88a
Author: Andreas Tille <tille at debian.org>
Date: Fri Jul 22 23:05:43 2016 +0200
do not use static lib
---
debian/patches/dont_use_static_lib.patch | 86 ++++++++++++++++++++++++++++++++
debian/patches/series | 1 +
2 files changed, 87 insertions(+)
diff --git a/debian/patches/dont_use_static_lib.patch b/debian/patches/dont_use_static_lib.patch
new file mode 100644
index 0000000..603a847
--- /dev/null
+++ b/debian/patches/dont_use_static_lib.patch
@@ -0,0 +1,86 @@
+--- a/test/fuse/Makefile
++++ b/test/fuse/Makefile
+@@ -52,7 +52,7 @@ REMOTE_FUSER_TEST_OBJ = \
+ $(addsuffix .$(OBJX),$(REMOTE_FUSER_TEST_SRC))
+
+ REMOTE_FUSER_TEST_LIB = \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -skapp
+
+ $(TEST_BINDIR)/remote-fuser-test: $(REMOTE_FUSER_TEST_OBJ)
+--- a/test/ngs-pileup/Makefile
++++ b/test/ngs-pileup/Makefile
+@@ -52,7 +52,7 @@ TEST_NGS_PILEUP_OBJ = \
+ TEST_NGS_PILEUP_LIB = \
+ -sngs-c++ \
+ -sncbi-ngs-c++ \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -skapp \
+ -sktst \
+
+--- a/tools/fastq-dump/Makefile
++++ b/tools/fastq-dump/Makefile
+@@ -72,7 +72,7 @@ clean: stdclean
+ DUMP_LIBS = \
+ -lncbi-ngs-c++ \
+ -lngs-c++ \
+- -lncbi-vdb-static \
++ -lncbi-vdb \
+ -lkapp \
+ -stk-version
+
+--- a/tools/ngs-pileup/Makefile
++++ b/tools/ngs-pileup/Makefile
+@@ -72,7 +72,7 @@ NGS_PILEUP_OBJ = \
+
+ NGS_PILEUP_LIBS = \
+ -sncbi-ngs-c++ \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -sngs-c++ \
+ -skapp \
+ -stk-version \
+--- a/tools/pileup-stats/Makefile
++++ b/tools/pileup-stats/Makefile
+@@ -71,7 +71,7 @@ PILEUP_STATS_LIB = \
+ -L$(NGS_LIBDIR) \
+ -sgeneral-writer \
+ -sncbi-ngs-c++ \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -sngs-c++ \
+ -skapp \
+ -stk-version \
+--- a/tools/ref-variation/Makefile
++++ b/tools/ref-variation/Makefile
+@@ -74,7 +74,7 @@ REF_VARIATION_OBJ = \
+
+ REF_VARIATION_LIB = \
+ -sncbi-ngs-c++ \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -sngs-c++ \
+ -skapp \
+ -stk-version \
+@@ -101,7 +101,7 @@ VAR_EXPAND_OBJ = \
+
+ VAR_EXPAND_LIB = \
+ -sncbi-ngs-c++ \
+- -sncbi-vdb-static \
++ -sncbi-vdb \
+ -sngs-c++ \
+ -skapp \
+ -stk-version \
+--- a/tools/sra-seq-count/Makefile
++++ b/tools/sra-seq-count/Makefile
+@@ -65,7 +65,7 @@ TOOL_LIBS = \
+ -stk-version \
+ -sncbi-ngs-c++ \
+ -sngs-c++ \
+- -sncbi-vdb-static
++ -sncbi-vdb
+
+ #-------------------------------------------------------------------------------
+ # fastq-dump
diff --git a/debian/patches/series b/debian/patches/series
index 55d5527..9e72439 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -6,3 +6,4 @@ find_ngs-sdk.patch
find_ncbi-vdb.patch
link_debian_packaged_libz.patch
link_debian_packaged_lmagic.patch
+dont_use_static_lib.patch
--
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