[med-svn] [sra-sdk] 02/02: drop library packages since these are now build by ncbi-vdb
Andreas Tille
tille at debian.org
Sat Jul 23 21:58:59 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository sra-sdk.
commit 5b44fef8531b5ec4f743683b1ac47ef6dbb0048e
Author: Andreas Tille <tille at debian.org>
Date: Sat Jul 23 23:58:49 2016 +0200
drop library packages since these are now build by ncbi-vdb
---
debian/changelog | 1 +
debian/control | 43 ------------------------------
debian/rules | 1 +
debian/sra-toolkit-libs-dev.install | 1 -
debian/sra-toolkit-libs0.install | 1 -
debian/sra-toolkit-libs0.lintian-overrides | 4 ---
6 files changed, 2 insertions(+), 49 deletions(-)
diff --git a/debian/changelog b/debian/changelog
index 8d3f3d1..e5327a7 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -8,6 +8,7 @@ sra-sdk (2.7.0-1) UNRELEASED; urgency=medium
* d/copyright: no need to exclude any files any more
* cme fix dpkg-control
* New Build-Depends: libhdf5-dev, libngs-sdk-dev (>= 1.2.4)
+ * drop library packages since these are now build by ncbi-vdb
[ Steffen Moeller and Jon Ison ]
* Introduced EDAM annotation to debian/upstream/edam
diff --git a/debian/control b/debian/control
index 2ad19ed..242dc86 100644
--- a/debian/control
+++ b/debian/control
@@ -5,13 +5,6 @@ Uploaders: Charles Plessy <plessy at debian.org>,
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
- libbz2-dev,
- zlib1g-dev,
- libxml2-dev,
- libhdf5-dev,
- libaec-dev,
- libmagic-dev,
- libfuse-dev,
libngs-sdk-dev (>= 1.2.4),
libncbi-vdb-dev
Standards-Version: 3.9.8
@@ -41,39 +34,3 @@ Description: utilities for the NCBI Sequence Read Archive
will remain supported wherever possible in order to preserve
operation of any existing scripts.
-Package: sra-toolkit-libs0
-Architecture: any
-Depends: ${shlibs:Depends},
- ${misc:Depends}
-Description: Libraries for the SRA Toolkit
- This package provides all libraries and modules for executing the
- NCBI SRA toolkit's programs. This currently includes:
- .
- libkdb # physical layer reading library
- libkfg # configuration library
- libkfs # file system library
- libklib # support library
- libkproc # process synchronization library
- libkq # cross-thread queue library
- libksproc # single-threaded emulation library
- libksrch # search algorithm library
- libkxfs # XML to filesystem library
- libkxml # XML container support library
- libload # loader tool utility library
- libsra-schema # weak-linked sra schema
- libsradb # API for accessing sra
- libsrapath # weak-link stubs for srapath
- libsrareader # reader library
- libvdb # virtual layer reading library
- libwkdb # physical layer update library
- libwsradb # update API for SRA
- libwvdb # virtual layer update library
-
-Package: sra-toolkit-libs-dev
-Architecture: any
-Depends: ${shlibs:Depends},
- ${misc:Depends},
- sra-toolkit-libs0
-Description: Development files for the NCBI SRA Toolkit's libraries
- This package provides development support files for the
- NCBI SRA Toolkit's libraries.
diff --git a/debian/rules b/debian/rules
index 5991e74..cccbb2b 100755
--- a/debian/rules
+++ b/debian/rules
@@ -31,6 +31,7 @@ override_dh_install:
mv debian/tmp/usr/bin/`readlink $$bin` $$bin ; \
mv debian/tmp/usr/bin/`readlink $$bin` $$bin ; \
done
+ dh_install
override_dh_auto_test:
echo "FIXME: try activating tests!!!!!!!!!!!!!!!!!!!!!!!!"
diff --git a/debian/sra-toolkit-libs-dev.install b/debian/sra-toolkit-libs-dev.install
deleted file mode 100644
index e7553b7..0000000
--- a/debian/sra-toolkit-libs-dev.install
+++ /dev/null
@@ -1 +0,0 @@
-lib??/*so usr/lib
diff --git a/debian/sra-toolkit-libs0.install b/debian/sra-toolkit-libs0.install
deleted file mode 100644
index 0b035c0..0000000
--- a/debian/sra-toolkit-libs0.install
+++ /dev/null
@@ -1 +0,0 @@
-lib??/*so.* usr/lib
diff --git a/debian/sra-toolkit-libs0.lintian-overrides b/debian/sra-toolkit-libs0.lintian-overrides
deleted file mode 100644
index 5701fa2..0000000
--- a/debian/sra-toolkit-libs0.lintian-overrides
+++ /dev/null
@@ -1,4 +0,0 @@
-# Temporarily needed as long as libsra-schema is weak-linked.
-sra-toolkit-libs0: non-dev-pkg-with-shlib-symlink usr/lib/libsra-schema.so.1.0.4 usr/lib/libsra-schema.so
-sra-toolkit-libs0: package-name-doesnt-match-sonames libncbi-vdb2 libncbi-wvdb2
-sra-toolkit-libs0: no-symbols-control-file usr/lib/ib*
--
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