[med-svn] r22076 - in trunk/packages/srst2/trunk/debian: . tests

[Andreas Tille]

Author: tille
Date: 2016-06-02 05:36:19 +0000 (Thu, 02 Jun 2016)
New Revision: 22076

Added:
   trunk/packages/srst2/trunk/debian/tests/
   trunk/packages/srst2/trunk/debian/tests/control
   trunk/packages/srst2/trunk/debian/tests/run-unit-test
Modified:
   trunk/packages/srst2/trunk/debian/control
   trunk/packages/srst2/trunk/debian/docs
   trunk/packages/srst2/trunk/debian/rules
Log:
Add build time and autopkgtest


Modified: trunk/packages/srst2/trunk/debian/control
===================================================================
--- trunk/packages/srst2/trunk/debian/control	2016-06-02 01:28:32 UTC (rev 22075)
+++ trunk/packages/srst2/trunk/debian/control	2016-06-02 05:36:19 UTC (rev 22076)
@@ -8,7 +8,9 @@
                python-all,
                python-setuptools,
                python-markdown,
-               dos2unix
+               dos2unix,
+               python-mock,
+               python-scipy,
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/srst2/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/srst2/trunk/

Modified: trunk/packages/srst2/trunk/debian/docs
===================================================================
--- trunk/packages/srst2/trunk/debian/docs	2016-06-02 01:28:32 UTC (rev 22075)
+++ trunk/packages/srst2/trunk/debian/docs	2016-06-02 05:36:19 UTC (rev 22076)
@@ -1,2 +1,3 @@
 README*.html
 example.txt
+tests

Modified: trunk/packages/srst2/trunk/debian/rules
===================================================================
--- trunk/packages/srst2/trunk/debian/rules	2016-06-02 01:28:32 UTC (rev 22075)
+++ trunk/packages/srst2/trunk/debian/rules	2016-06-02 05:36:19 UTC (rev 22076)
@@ -30,6 +30,13 @@
 	chmod +x debian/$(DEBPKGNAME)/usr/share/$(DEBPKGNAME)/database_clustering/csv_to_gene_db.py
 	chmod +x debian/$(DEBPKGNAME)/usr/share/$(DEBPKGNAME)/database_clustering/*.sh
 
+override_dh_auto_test:
+	cd tests && python test_slurm_srst2.py && python test_srst2.py 
+
+override_dh_installdocs:
+	dh_installdocs
+	sed -i "s?sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__).*scripts.*?sys.path.append(os.path.abspath('/usr/share/$(DEBPKGNAME)'))?" debian/$(DEBPKGNAME)/usr/share/doc/$(DEBPKGNAME)/tests/*.py
+
 # README.html contains a really maintained changelog
 #override_dh_installchangelogs:
 #	dh_installchangelogs CHANGES.txt

Added: trunk/packages/srst2/trunk/debian/tests/control
===================================================================
--- trunk/packages/srst2/trunk/debian/tests/control	                        (rev 0)
+++ trunk/packages/srst2/trunk/debian/tests/control	2016-06-02 05:36:19 UTC (rev 22076)
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @, python-mock
+Restrictions: allow-stderr

Added: trunk/packages/srst2/trunk/debian/tests/run-unit-test
===================================================================
--- trunk/packages/srst2/trunk/debian/tests/run-unit-test	                        (rev 0)
+++ trunk/packages/srst2/trunk/debian/tests/run-unit-test	2016-06-02 05:36:19 UTC (rev 22076)
@@ -0,0 +1,14 @@
+#!/bin/sh -e
+
+pkg=srst2
+
+if [ "$ADTTMP" = "" ] ; then
+  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+fi
+cd $ADTTMP
+cp /usr/share/doc/$pkg/tests/* $ADTTMP
+find . -name "*.gz" -exec gunzip \{\} \;
+for runtest in *.py ; do
+    python $runtest
+done
+# rm -rf *