[med-svn] [subread] branch upstream updated (8b7078e -> 5c4e244)
Alex Mestiashvili
malex-guest at moszumanska.debian.org
Fri Jun 3 13:08:01 UTC 2016
This is an automated email from the git hooks/post-receive script.
malex-guest pushed a change to branch upstream
in repository subread.
from 8b7078e Imported Upstream version 1.5.0-p2+dfsg
new 5c4e244 Imported Upstream version 1.5.0-p3+dfsg
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
doc/SubreadUsersGuide.tex | 6 +-
src/HelperFunctions.c | 91 +++++++++++++
src/HelperFunctions.h | 2 +
src/Makefile | 1 -
src/SNPCalling.c | 63 ++++++---
src/core-indel.c | 5 +-
src/core.c | 57 ++++----
src/input-files.c | 338 ++++++++++++++++++++++++++++++++++++++++------
src/input-files.h | 4 +
src/makefile.version | 2 +-
src/propmapped.c | 1 +
src/readSummary.c | 7 +-
src/test-fisher.c | 84 ++++++++++++
13 files changed, 567 insertions(+), 94 deletions(-)
create mode 100644 src/test-fisher.c
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