[med-svn] r22199 - trunk/packages/R/r-bioc-ensembldb/trunk/debian

Sat Jun 25 15:21:42 UTC 2016

Author: tille
Date: 2016-06-25 15:21:41 +0000 (Sat, 25 Jun 2016)
New Revision: 22199

Modified:
   trunk/packages/R/r-bioc-ensembldb/trunk/debian/changelog
   trunk/packages/R/r-bioc-ensembldb/trunk/debian/copyright
Log:
New upstream, fixed copyright


Modified: trunk/packages/R/r-bioc-ensembldb/trunk/debian/changelog
===================================================================

--- trunk/packages/R/r-bioc-ensembldb/trunk/debian/changelog	2016-06-24 17:46:24 UTC (rev 22198)
+++ trunk/packages/R/r-bioc-ensembldb/trunk/debian/changelog	2016-06-25 15:21:41 UTC (rev 22199)
@@ -1,4 +1,4 @@
-r-bioc-ensembldb (1.4.3-1) unstable; urgency=low
+r-bioc-ensembldb (1.4.6-1) unstable; urgency=low
 
   * Initial release (closes: #825906)
 

Modified: trunk/packages/R/r-bioc-ensembldb/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-ensembldb/trunk/debian/copyright	2016-06-24 17:46:24 UTC (rev 22198)
+++ trunk/packages/R/r-bioc-ensembldb/trunk/debian/copyright	2016-06-25 15:21:41 UTC (rev 22199)
@@ -8,6 +8,104 @@
                      Tim Triche <tim.triche at usc.edu> 
 License: LGPL-2.1+
 
+Files: R/makeEnsemblDbPackage.R
+       man/makeEnsemblDbPackage.Rd
+Copyright: 2006-2014 M. Carlson, H. Pages, P. Aboyoun, S. Falcon, M. Morgan, D. Sarkar, M. Lawrence
+License: Artistic-2.0
+			 The "Artistic License"
+ .
+				Preamble
+ .
+ 1. You may make and give away verbatim copies of the source form of the
+    Standard Version of this Package without restriction, provided that
+    you duplicate all of the original copyright notices and associated
+    disclaimers.
+ .
+ 2. You may apply bug fixes, portability fixes and other modifications
+    derived from the Public Domain or from the Copyright Holder.  A
+    Package modified in such a way shall still be considered the Standard
+    Version.
+ .
+ 3. You may otherwise modify your copy of this Package in any way,
+    provided that you insert a prominent notice in each changed file stating
+    how and when you changed that file, and provided that you do at least
+    ONE of the following:
+ .
+    a) place your modifications in the Public Domain or otherwise make them
+    Freely Available, such as by posting said modifications to Usenet or
+    an equivalent medium, or placing the modifications on a major archive
+    site such as uunet.uu.net, or by allowing the Copyright Holder to include
+    your modifications in the Standard Version of the Package.
+ .
+    b) use the modified Package only within your corporation or organization.
+ .
+    c) rename any non-standard executables so the names do not conflict
+    with standard executables, which must also be provided, and provide
+    a separate manual page for each non-standard executable that clearly
+    documents how it differs from the Standard Version.
+ .
+    d) make other distribution arrangements with the Copyright Holder.
+ .
+ 4. You may distribute the programs of this Package in object code or
+    executable form, provided that you do at least ONE of the following:
+ .
+    a) distribute a Standard Version of the executables and library files,
+    together with instructions (in the manual page or equivalent) on where
+    to get the Standard Version.
+ .
+    b) accompany the distribution with the machine-readable source of
+    the Package with your modifications.
+ .
+    c) give non-standard executables non-standard names, and clearly
+    document the differences in manual pages (or equivalent), together
+    with instructions on where to get the Standard Version.
+ .
+    d) make other distribution arrangements with the Copyright Holder.
+ .
+ 5. You may charge a reasonable copying fee for any distribution of this
+    Package.  You may charge any fee you choose for support of this Package.
+    You may not charge a fee for this Package itself.  However, you may
+    distribute this Package in aggregate with other (possibly commercial)
+    programs as part of a larger (possibly commercial) software distribution
+    provided that you do not advertise this Package as a product of your
+    own.  You may embed this Package's interpreter within an executable of
+    yours (by linking); this shall be construed as a mere form of
+    aggregation, provided that the complete Standard Version of the
+    interpreter is so embedded.
+ .
+ 6. The scripts and library files supplied as input to or produced as
+    output from the programs of this Package do not automatically fall under
+    the copyright of this Package, but belong to whoever generated them, and
+    may be sold commercially, and may be aggregated with this Package.  If
+    such scripts or library files are aggregated with this Package via the
+    so-called "undump" or "unexec" methods of producing a binary executable
+    image, then distribution of such an image shall neither be construed as
+    a distribution of this Package nor shall it fall under the restrictions
+    of Paragraphs 3 and 4, provided that you do not represent such an
+    executable image as a Standard Version of this Package.
+ .
+ 7. C subroutines (or comparably compiled subroutines in other
+    languages) supplied by you and linked into this Package in order to
+    emulate subroutines and variables of the language defined by this
+    Package shall not be considered part of this Package, but are the
+    equivalent of input as in Paragraph 6, provided these subroutines do
+    not change the language in any way that would cause it to fail the
+    regression tests for the language.
+ .
+ 8. Aggregation of this Package with a commercial distribution is always
+    permitted provided that the use of this Package is embedded; that is,
+    when no overt attempt is made to make this Package's interfaces visible
+    to the end user of the commercial distribution.  Such use shall not be
+    construed as a distribution of this Package.
+ .
+ 9. The name of the Copyright Holder may not be used to endorse or promote
+    products derived from this software without specific prior written permission.
+ .
+ 10. THIS PACKAGE IS PROVIDED "AS IS" AND WITHOUT ANY EXPRESS OR
+    IMPLIED WARRANTIES, INCLUDING, WITHOUT LIMITATION, THE IMPLIED
+    WARRANTIES OF MERCHANTIBILITY AND FITNESS FOR A PARTICULAR PURPOSE.
+Comment: part of this code is from GenomicFeatures makeTxDbPackage.R
+
 Files: debian/*
 Copyright: 2016 Andreas Tille <tille at debian.org>
 License: LGPL-2.1+


