[med-svn] [snakemake] branch master updated (8aaa682 -> 11f9056)

[Kevin Murray]

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daube-guest pushed a change to branch master
in repository snakemake.

      from  8aaa682   Bump standards version
       new  9445144   Imported Upstream version 3.7.1+dfsg
       new  4b49fbe   Merge tag 'upstream/3.7.1+dfsg'
       new  043d147   Bump changelog
       new  56349d6   Bump standards version => 3.9.8
       new  11f9056   fix git link URL

The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 CHANGELOG.md             | 14 ++++++++++++++
 debian/changelog         |  7 +++++++
 debian/control           |  4 ++--
 environment.yml          | 15 +++++++++++++++
 setup.py                 |  2 +-
 snakemake/__init__.py    | 39 ++++++++++++++++++++++++++++++---------
 snakemake/common.py      |  1 +
 snakemake/dag.py         |  3 ++-
 snakemake/executors.py   | 40 +++++++++++++++++++++++++++++++++-------
 snakemake/io.py          | 11 +++++------
 snakemake/jobs.py        | 15 ++++++++++-----
 snakemake/logging.py     | 27 +++++++++++++++++++++------
 snakemake/remote/HTTP.py | 14 ++++++++++----
 snakemake/rules.py       | 16 ++++++----------
 snakemake/scheduler.py   |  7 +++++--
 snakemake/utils.py       | 24 ++++++++++++++++++++++++
 snakemake/version.py     |  2 +-
 snakemake/workflow.py    | 12 +++++++-----
 18 files changed, 194 insertions(+), 59 deletions(-)
 create mode 100644 environment.yml
 create mode 100644 snakemake/common.py

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