[med-svn] [r-bioc-cummerbund] branch master updated (3d85e45 -> 0526e88)

[Andreas Tille]

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tille pushed a change to branch master
in repository r-bioc-cummerbund.

      from  3d85e45   Alternate patch for vignettes allowing post-install building
       new  a29b49c   Imported Upstream version 2.14.0
       new  a5caec0   Merge tag 'upstream/2.14.0'
       new  0526e88   New upstream version

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Summary of changes:
 DESCRIPTION                              |   6 +-
 NAMESPACE                                |   4 +-
 R/database-setup.R                       |   2 +-
 R/methods-CuffData.R                     | 209 ++++++++++++++++---------------
 R/methods-CuffFeatureSet.R               |   1 +
 R/methods-CuffGene.R                     |   1 +
 R/methods-CuffSet.R                      |   4 +-
 build/vignette.rds                       | Bin 302 -> 301 bytes
 debian/changelog                         |   6 +
 inst/doc/cummeRbund-example-workflow.pdf | Bin 198167 -> 197972 bytes
 inst/doc/cummeRbund-manual.pdf           | Bin 1567910 -> 1568280 bytes
 man/createDB.Rd                          |  36 ------
 12 files changed, 122 insertions(+), 147 deletions(-)
 delete mode 100644 man/createDB.Rd

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