[med-svn] [macs] branch master updated (bbae631 -> 20503bf)

[Michael Crusoe]

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misterc-guest pushed a change to branch master
in repository macs.

      from  bbae631   Upload to unstable
       new  68b18f1   Imported Upstream version 2.1.1.20160226
       new  f6afafb   Merge tag 'upstream/2.1.1.20160226'
       new  20503bf   bump version & refresh spelling patch

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 ChangeLog                   |    35 +
 MACS2.egg-info/PKG-INFO     |     2 +-
 MACS2/Constants.py          |     2 +-
 MACS2/IO/BedGraph.c         |   112 +-
 MACS2/IO/BedGraph.pyx       |     4 +-
 MACS2/IO/CallPeakUnit.c     |  4932 ++++-----
 MACS2/IO/CallPeakUnit.pyx   |     9 +-
 MACS2/IO/PairedEndTrack.c   |   260 +-
 MACS2/IO/PairedEndTrack.pyx |    15 +-
 MACS2/IO/Parser.c           | 22751 +++++++++++++++++++-----------------------
 MACS2/IO/Parser.pyx         |   584 +-
 MACS2/IO/PeakIO.c           |  4438 ++++----
 MACS2/IO/PeakIO.pyx         |     4 +-
 MACS2/IO/ScoreTrack.c       |  5465 +++++-----
 MACS2/IO/ScoreTrack.pyx     |    20 +-
 MACS2/OptValidator.py       |    21 +-
 MACS2/Pileup.c              |     2 +-
 MACS2/Pileup.pyx            |     2 +-
 MACS2/bdgcmp_cmd.py         |     4 +-
 MACS2/bdgopt_cmd.py         |    18 +-
 MACS2/callpeak_cmd.py       |    11 +-
 PKG-INFO                    |     2 +-
 README.rst                  |    30 +-
 bin/macs2                   |    23 +-
 debian/changelog            |     6 +
 debian/control              |     2 +-
 debian/patches/spelling     |    26 +-
 setup.py                    |    37 +-
 setup_w_cython.py           |    67 +-
 29 files changed, 18106 insertions(+), 20778 deletions(-)

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