[med-svn] [macs] 02/03: Merge tag 'upstream/2.1.1.20160226'
Michael Crusoe
misterc-guest at moszumanska.debian.org
Sat Mar 5 17:54:16 UTC 2016
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misterc-guest pushed a commit to branch master
in repository macs.
commit f6afafb36c0c396a5867986e63e9586df78a3a90
Merge: bbae631 68b18f1
Author: Michael R. Crusoe <crusoe at ucdavis.edu>
Date: Sat Mar 5 09:24:03 2016 -0800
Merge tag 'upstream/2.1.1.20160226'
Upstream version 2.1.1.20160226
ChangeLog | 35 +
MACS2.egg-info/PKG-INFO | 2 +-
MACS2/Constants.py | 2 +-
MACS2/IO/BedGraph.c | 112 +-
MACS2/IO/BedGraph.pyx | 4 +-
MACS2/IO/CallPeakUnit.c | 4932 ++++-----
MACS2/IO/CallPeakUnit.pyx | 9 +-
MACS2/IO/PairedEndTrack.c | 260 +-
MACS2/IO/PairedEndTrack.pyx | 15 +-
MACS2/IO/Parser.c | 22751 +++++++++++++++++++-----------------------
MACS2/IO/Parser.pyx | 584 +-
MACS2/IO/PeakIO.c | 4438 ++++----
MACS2/IO/PeakIO.pyx | 4 +-
MACS2/IO/ScoreTrack.c | 5465 +++++-----
MACS2/IO/ScoreTrack.pyx | 20 +-
MACS2/OptValidator.py | 21 +-
MACS2/Pileup.c | 2 +-
MACS2/Pileup.pyx | 2 +-
MACS2/bdgcmp_cmd.py | 4 +-
MACS2/bdgopt_cmd.py | 18 +-
MACS2/callpeak_cmd.py | 11 +-
PKG-INFO | 2 +-
README.rst | 30 +-
bin/macs2 | 23 +-
setup.py | 37 +-
setup_w_cython.py | 67 +-
26 files changed, 18085 insertions(+), 20765 deletions(-)
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