[med-svn] [proteinortho] branch master updated (5226a4d -> 1f05982)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository proteinortho.

      from  5226a4d   Upload to new
       new  961d8d2   make better use of uscan options
       new  d8a5c6c   Imported Upstream version 5.12+dfsg
       new  13a6890   Merge tag 'upstream/5.12+dfsg'
       new  249ceee   New upstream version
       new  c29c3ae   cme fix dpkg-control
       new  719a346   Adapt patches
       new  1f05982   Fix C-Syntax

The 7 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile                        |   7 +-
 basic-types.h                   |  58 +++++
 debian/changelog                |   9 +
 debian/control                  |   4 +-
 debian/patches/fix_syntax.patch |  15 ++
 debian/patches/hardening.patch  |  10 +-
 debian/patches/series           |   1 +
 debian/watch                    |   2 +-
 ffadj_mcs.py                    |   6 +-
 manual.html                     |   3 +-
 po2tree.pl                      | 161 +++++++++++++
 po_tree                         | Bin 0 -> 17650 bytes
 po_tree.c                       | 484 ++++++++++++++++++++++++++++++++++++++++
 proteinortho5.pl                |  20 +-
 proteinortho5_clustering.cpp    |  36 ++-
 proteinortho5_tree              | Bin 0 -> 72584 bytes
 16 files changed, 796 insertions(+), 20 deletions(-)
 create mode 100644 basic-types.h
 create mode 100644 debian/patches/fix_syntax.patch
 create mode 100755 po2tree.pl
 create mode 100755 po_tree
 create mode 100644 po_tree.c
 create mode 100755 proteinortho5_tree

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