[med-svn] [proteinortho] branch upstream updated (ea9bcb2 -> d8a5c6c)

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch upstream
in repository proteinortho.

      from  ea9bcb2   Imported Upstream version 5.11+dfsg
       new  d8a5c6c   Imported Upstream version 5.12+dfsg

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile                     |   7 +-
 basic-types.h                |  58 ++++++
 ffadj_mcs.py                 |   6 +-
 manual.html                  |   3 +-
 po2tree.pl                   | 161 ++++++++++++++
 po_tree                      | Bin 0 -> 17650 bytes
 po_tree.c                    | 484 +++++++++++++++++++++++++++++++++++++++++++
 proteinortho5.pl             |  20 +-
 proteinortho5_clustering.cpp |  36 +++-
 proteinortho5_tree           | Bin 0 -> 72584 bytes
 10 files changed, 761 insertions(+), 14 deletions(-)
 create mode 100644 basic-types.h
 create mode 100755 po2tree.pl
 create mode 100755 po_tree
 create mode 100644 po_tree.c
 create mode 100755 proteinortho5_tree

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