[med-svn] [vsearch] 04/04: Remove patch applied upstream

[Andreas Tille]

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tille pushed a commit to branch master
in repository vsearch.

commit 4a4f7f012d526af4a2442f6eed77ccf32e0424f8
Author: Andreas Tille <tille at debian.org>
Date:   Thu Mar 10 23:23:33 2016 +0100

    Remove patch applied upstream
---
 debian/patches/series         |  1 -
 debian/patches/spelling.patch | 44 -------------------------------------------
 2 files changed, 45 deletions(-)

diff --git a/debian/patches/series b/debian/patches/series
index 75870a2..87193bd 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1,2 +1 @@
 sysconf_memory_sizing.patch
-spelling.patch
diff --git a/debian/patches/spelling.patch b/debian/patches/spelling.patch
deleted file mode 100644
index d2a5de6..0000000
--- a/debian/patches/spelling.patch
+++ /dev/null
@@ -1,44 +0,0 @@
-Description: Fix some spelling issues
-Author: Andreas Tille <tille at debian.org>
-Last-Update: Sat, 30 Jan 2016 14:02:24 +0100
-
---- a/src/vsearch.cc
-+++ b/src/vsearch.cc
-@@ -2153,7 +2153,7 @@ void cmd_shuffle()
- void cmd_subsample()
- {
-   if ((!opt_fastaout) && (!opt_fastqout))
--    fatal("Specifiy output files for subsampling with --fastaout and/or --fastqout");
-+    fatal("Specify output files for subsampling with --fastaout and/or --fastqout");
- 
-   if ((opt_sample_pct > 0) == (opt_sample_size > 0))
-     fatal("Specify either --sample_pct or --sample_size, not both");
-@@ -2172,7 +2172,7 @@ void cmd_maskfasta()
- void cmd_fastx_mask()
- {
-   if ((!opt_fastaout) && (!opt_fastqout))
--    fatal("Specifiy output files for masking with --fastaout and/or --fastqout");
-+    fatal("Specify output files for masking with --fastaout and/or --fastqout");
- 
-   fastx_mask();
- }
---- a/man/vsearch.1
-+++ b/man/vsearch.1
-@@ -840,7 +840,7 @@ truncation) will be discarded (1 by defa
- ambiguous bases (N's), as specified with the \-\-fastq_maxns will also
- be discarded (no limit by default). Staggered reads will not be merged
- unless the \-\-fastq_allowmergestagger option is specified. The
--minimum length of the overlap region between the reads may be specfied
-+minimum length of the overlap region between the reads may be specified
- with the \-\-minovlen option (default 1), and the overlap region may
- not include more mismatches than specified with the \-\-maxdiffs
- option (no limit by default), otherwise the read pair will be
-@@ -986,7 +986,7 @@ The argument to the \-\-qmask and \-\-db
- or dust. If the argument is none, the no masking is performed. If the
- argument is soft the lower case symbols will be masked. Finally, if
- the argument is dust, the sequence will be masked using the DUST
--algorith by Tatusov and Lipman to mask low-complexity regions.
-+algorithm by Tatusov and Lipman to mask low-complexity regions.
- 
- If the \-\-hardmask option is specified, all masked regions will be
- converted to N's, otherwise masked regions will be indicated by lower

-- 
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