[med-svn] [tophat] 05/06: Apply cme fix dpkg

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a commit to branch master
in repository tophat.

commit b2ef3c924088f26a206023fc9efc636742fe6c64
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Thu Mar 17 14:38:04 2016 +0100

    Apply cme fix dpkg
---
 debian/control                          | 6 +++---
 debian/patches/fix_includes_path.patch  | 3 +--
 debian/patches/hardening4samtools.patch | 3 +--
 3 files changed, 5 insertions(+), 7 deletions(-)

diff --git a/debian/control b/debian/control
index c9101ed..bca6057 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,7 @@ Section: science
 Priority: optional
 Build-Depends: debhelper (>= 9),
                autotools-dev,
-               libbam-dev (>= 0.1.16),
+               libbam-dev,
                zlib1g-dev,
                dh-autoreconf,
                python,
@@ -15,9 +15,9 @@ Build-Depends: debhelper (>= 9),
                libboost-system-dev,
                libboost-thread-dev,
                help2man
-Standards-Version: 3.9.6
+Standards-Version: 3.9.7
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/tophat.git
-Vcs-Git: git://anonscm.debian.org/debian-med/tophat.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/tophat.git
 Homepage: http://ccb.jhu.edu/software/tophat
 
 Package: tophat
diff --git a/debian/patches/fix_includes_path.patch b/debian/patches/fix_includes_path.patch
index b4341f7..dcc3575 100644
--- a/debian/patches/fix_includes_path.patch
+++ b/debian/patches/fix_includes_path.patch
@@ -1,5 +1,4 @@
-Description: Fix_includes_path
-Subject: Corrected location for samtools .h files 
+Description: Corrected location for samtools .h files
 From: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
 --- tophat.orig/src/align_status.h
 +++ tophat/src/align_status.h
diff --git a/debian/patches/hardening4samtools.patch b/debian/patches/hardening4samtools.patch
index ea04e09..dc2142e 100644
--- a/debian/patches/hardening4samtools.patch
+++ b/debian/patches/hardening4samtools.patch
@@ -1,5 +1,4 @@
-Description: Hardening for samtools
-Subject: add hardening flags to embedded copy of samtools
+Description: add hardening flags to embedded copy of samtools
 Author: Alex Mestiashvili <alex at biotec.tu-dresden.de>
 --- a/src/samtools-0.1.18/Makefile
 +++ b/src/samtools-0.1.18/Makefile

-- 
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