[med-svn] [tophat] 05/06: Apply cme fix dpkg
Alex Mestiashvili
malex-guest at moszumanska.debian.org
Thu Mar 17 13:47:29 UTC 2016
This is an automated email from the git hooks/post-receive script.
malex-guest pushed a commit to branch master
in repository tophat.
commit b2ef3c924088f26a206023fc9efc636742fe6c64
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date: Thu Mar 17 14:38:04 2016 +0100
Apply cme fix dpkg
---
debian/control | 6 +++---
debian/patches/fix_includes_path.patch | 3 +--
debian/patches/hardening4samtools.patch | 3 +--
3 files changed, 5 insertions(+), 7 deletions(-)
diff --git a/debian/control b/debian/control
index c9101ed..bca6057 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,7 @@ Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
autotools-dev,
- libbam-dev (>= 0.1.16),
+ libbam-dev,
zlib1g-dev,
dh-autoreconf,
python,
@@ -15,9 +15,9 @@ Build-Depends: debhelper (>= 9),
libboost-system-dev,
libboost-thread-dev,
help2man
-Standards-Version: 3.9.6
+Standards-Version: 3.9.7
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/tophat.git
-Vcs-Git: git://anonscm.debian.org/debian-med/tophat.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/tophat.git
Homepage: http://ccb.jhu.edu/software/tophat
Package: tophat
diff --git a/debian/patches/fix_includes_path.patch b/debian/patches/fix_includes_path.patch
index b4341f7..dcc3575 100644
--- a/debian/patches/fix_includes_path.patch
+++ b/debian/patches/fix_includes_path.patch
@@ -1,5 +1,4 @@
-Description: Fix_includes_path
-Subject: Corrected location for samtools .h files
+Description: Corrected location for samtools .h files
From: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
--- tophat.orig/src/align_status.h
+++ tophat/src/align_status.h
diff --git a/debian/patches/hardening4samtools.patch b/debian/patches/hardening4samtools.patch
index ea04e09..dc2142e 100644
--- a/debian/patches/hardening4samtools.patch
+++ b/debian/patches/hardening4samtools.patch
@@ -1,5 +1,4 @@
-Description: Hardening for samtools
-Subject: add hardening flags to embedded copy of samtools
+Description: add hardening flags to embedded copy of samtools
Author: Alex Mestiashvili <alex at biotec.tu-dresden.de>
--- a/src/samtools-0.1.18/Makefile
+++ b/src/samtools-0.1.18/Makefile
--
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