[med-svn] [tophat] 04/06: Drop unused patch

[Alex Mestiashvili]

This is an automated email from the git hooks/post-receive script.

malex-guest pushed a commit to branch master
in repository tophat.

commit 9781be82c95c0abb163c1efd626fa36a7d12cd3e
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Thu Mar 17 19:57:59 2016 +0100

    Drop unused patch
---
 debian/patches/const_ness_part1.patch | 22 ----------------------
 1 file changed, 22 deletions(-)

diff --git a/debian/patches/const_ness_part1.patch b/debian/patches/const_ness_part1.patch
deleted file mode 100644
index 6255c3c..0000000
--- a/debian/patches/const_ness_part1.patch
+++ /dev/null
@@ -1,22 +0,0 @@
-Author: Diane Trout <diane at ghic.org>
-Last-Update: Thu, 10 Apr 2014 15:29:38 -0700
-Description: The patch deals with one of the compile errors in Bug #733352.
- I don't know if just hiding the const modifier is better than pushing
- const-ness further into tophat.
- .
- Unfortunately the next const error I get is even worse. Const-ness seems to
- get flipped between appendValue and trying to create a seqan::Gaps...
-
---- tophat.orig/src/segment_juncs.cpp
-+++ tophat/src/segment_juncs.cpp
-@@ -2056,8 +2056,8 @@
-     
-     MotifMap ims;
- 	
--    seqan::DnaStringReverseComplement rev_donor_dinuc(donor_dinuc);
--    seqan::DnaStringReverseComplement rev_acceptor_dinuc(acceptor_dinuc);
-+    seqan::DnaStringReverseComplement rev_donor_dinuc(const_cast<DnaString&>(donor_dinuc));
-+    seqan::DnaStringReverseComplement rev_acceptor_dinuc(const_cast<DnaString&>(acceptor_dinuc));
-     
-     if (talkative)
-         fprintf(stderr, "Collecting potential splice sites in islands\n");

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/tophat.git