[med-svn] [gnumed-server] branch master updated (7ba1ecc -> 3a31e83)
Andreas Tille
tille at debian.org
Sat Mar 19 14:22:14 UTC 2016
This is an automated email from the git hooks/post-receive script.
tille pushed a change to branch master
in repository gnumed-server.
from 7ba1ecc New upstream version, secure Vcs URI
new e63f6d1 Imported Upstream version 21.0
new d9aac1d Merge tag 'upstream/21.0'
new ceea7f4 New major upstream version
new 637cf21 Bumped minimum required postgresql version
new 3057778 cme fix dpkg-control
new c9a0847 Upload to unstable
new 3a31e83 New gnumed-restore.conf taken over from upstream
The 7 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
debian/changelog | 13 +
debian/control | 4 +-
debian/install | 1 +
server/bootstrap/bootstrap-latest.bat | 6 +-
server/bootstrap/bootstrap-latest.conf | 1 +
server/bootstrap/bootstrap-latest.sh | 6 +-
server/bootstrap/bootstrap_gm_db_system.py | 54 +-
server/bootstrap/fixup_db-v20.conf | 1 +
.../{fixup_db-v20.conf => fixup_db-v21.conf} | 28 +-
server/bootstrap/gmAuditSchemaGenerator.py | 331 +-
server/bootstrap/gmDBPruningDMLGenerator.py | 8 +-
server/bootstrap/update_db-v19_v20.conf | 1 +
server/bootstrap/update_db-v20_v21.conf | 326 +
server/doc/{gm-backup_database.8 => gm-backup.8} | 17 +-
server/doc/gm-restore_database_from_archive.8 | 35 +
.../doc/schema/gnumed-entire_schema-no_audit.dot | 285 +-
server/doc/schema/gnumed-entire_schema.html | 68329 ++++++++++++-------
server/etc/gnumed/gnumed-backup.conf.example | 2 +-
.../conf => server/etc/gnumed}/gnumed-restore.conf | 8 +-
server/etc/gnumed/gnumed-restore.conf.example | 31 -
server/gm-adjust_db_settings.sh | 25 +-
server/{gm-backup_database.sh => gm-backup.sh} | 32 +-
server/gm-backup_data.sh | 2 +-
server/gm-backup_database.sh | 4 +-
server/gm-fingerprint_db.py | 27 +-
server/gm-restore_database.sh | 2 +
...base.sh => gm-restore_database_from_archive.sh} | 130 +-
server/pycommon/gmBackendListener.py | 79 +-
server/pycommon/gmBorg.py | 27 +-
server/pycommon/gmBusinessDBObject.py | 94 +-
server/pycommon/gmCfg.py | 12 +-
server/pycommon/gmCfg2.py | 66 +-
server/pycommon/gmConfigCommon.py | 872 -
server/pycommon/gmDateTime.py | 191 +-
server/pycommon/gmDispatcher.py | 67 +-
server/pycommon/gmExceptions.py | 53 +-
server/pycommon/gmGuiBroker.py | 146 +-
server/pycommon/gmHooks.py | 15 +-
server/pycommon/gmI18N.py | 43 +-
server/pycommon/gmLog2.py | 9 +-
server/pycommon/gmLoginInfo.py | 11 +-
server/pycommon/gmMatchProvider.py | 12 +-
server/pycommon/gmMimeLib.py | 115 +-
server/pycommon/gmMimeMagic.py | 35 +-
server/pycommon/gmNetworkTools.py | 21 +-
server/pycommon/gmNull.py | 15 +-
server/pycommon/gmPG2.py | 344 +-
server/pycommon/gmPrinting.py | 36 +-
server/pycommon/gmPsql.py | 78 +-
server/pycommon/gmScanBackend.py | 19 +-
server/pycommon/gmScriptingListener.py | 2 +-
server/pycommon/gmShellAPI.py | 23 +-
server/pycommon/gmTools.py | 751 +-
.../sql/country.specific/au/gmDemographics.au.sql | 65 -
.../country.specific/ca/gmDemographics-Data.ca.sql | 33 +-
server/sql/country.specific/de/Impfplan-FSME.sql | 27 +-
.../sql/country.specific/de/Impfplan-Influenza.sql | 45 -
.../sql/country.specific/de/Impfplan-Prevenar.sql | 44 +-
server/sql/country.specific/de/Impfplan-Typhus.sql | 12 -
server/sql/country.specific/de/Impfstoffe.sql | 105 +-
server/sql/country.specific/de/PLZ.sql | 84 +-
.../sql/country.specific/de/STIKO-Impfkalender.sql | 88 +-
.../de/amis-import_data_template.sql | 26 -
server/sql/country.specific/de/gmATC.sql | 69 +-
.../sql/country.specific/de/gmDemographics.de.sql | 56 +-
server/sql/country.specific/de/gmDiagnosen.sql | 44 +-
server/sql/country.specific/de/gmUebersetzung.sql | 83 +-
server/sql/country.specific/de/gmVornamen.sql | 126 +-
.../country.specific/es/gmDemographics-Data.es.sql | 62 +-
server/sql/gmClinicalData.sql | 160 +-
server/sql/gmCountryZones.sql | 33 +-
server/sql/test-data/test_data-James_Kirk.sql | 287 -
.../test_data-Kirk_hospital_stay-dynamic.sql | 21 -
server/sql/v14-v15/python/v15-import-atc.py | 5 +-
.../v19-v20/dynamic/v20-release_notes-dynamic.sql | 14 +-
.../fixups/v20-clin-procedure-fixup.sql} | 17 +-
.../data/v21-Begleitbrief.tex} | 8 +-
.../v21-Medikationsplan_AMTS-2.0-nicht_konform.tex | 383 +
.../v20-v21/data/v21-Medikationsplan_AMTS-2.0.tex | 381 +
.../data/v21-aktuelle-Medikationsliste.tex} | 45 +-
.../sql/v20-v21/data/v21-gm2gpl-plot_one_test.gpl | 59 +
.../sql/v20-v21/data/v21-gm2gpl-plot_two_tests.gpl | 73 +
server/sql/v20-v21/dynamic/v21-HIT_risk.sql | 65 +
.../sql/v20-v21/dynamic/v21-audit-constraints.sql | 117 +
.../v20-v21/dynamic/v21-blobs-doc_med-dynamic.sql | 92 +
.../dynamic/v21-blobs-v_doc_desc.sql} | 22 +-
.../dynamic/v21-blobs-v_doc_med_journal.sql | 93 +
.../dynamic/v21-blobs-v_latest_mugshot.sql} | 20 +-
.../dynamic/v21-blobs-v_obj4doc_no_data.sql} | 76 +-
.../dynamic/v21-blobs-v_reviewed_doc_objects.sql} | 22 +-
.../dynamic/v21-cfg-cfg_str_array-dynamic.sql} | 6 +-
.../v20-v21/dynamic/v21-clin-procedure-dynamic.sql | 54 +
.../sql/v20-v21/dynamic/v21-clin-sanity_checks.sql | 122 +
.../dynamic/v21-clin-substance_intake-dynamic.sql | 337 +
.../sql/v20-v21/dynamic/v21-clin-v_edc_journal.sql | 90 +
.../dynamic/v21-clin-v_emr_journal.sql} | 19 +-
.../dynamic/v21-clin-v_export_items.sql} | 6 +-
.../dynamic/v21-clin-v_external_care_journal.sql | 90 +
.../dynamic/v21-clin-v_family_history_journal.sql} | 52 +-
.../dynamic/v21-clin-v_health_issues_journal.sql | 123 +
.../dynamic/v21-clin-v_hospital_stays_journal.sql | 352 +
.../dynamic/v21-clin-v_narrative4search.sql} | 27 +-
.../dynamic/v21-clin-v_pat_allergies_journal.sql | 90 +
.../v21-clin-v_pat_allergy_state_journal.sql | 191 +
.../dynamic/v21-clin-v_pat_encounters_journal.sql | 122 +
.../dynamic/v21-clin-v_pat_episodes_journal.sql | 107 +
.../dynamic/v21-clin-v_pat_narrative_journal.sql | 87 +
.../dynamic/v21-clin-v_procedures_journal.sql} | 115 +-
.../dynamic/v21-clin-v_reminders_journal.sql | 323 +
...21-clin-v_substance_intake4narrative_search.sql | 46 +
.../v21-clin-v_substance_intake_journal.sql | 258 +
.../dynamic/v21-clin-v_substance_intakes.sql} | 221 +-
.../dynamic/v21-clin-v_suppressed_hints.sql | 50 +
.../v21-clin-v_suppressed_hints_journal.sql | 98 +
.../dynamic/v21-clin-v_test_results_journal.sql} | 41 +-
.../dynamic/v21-clin-v_vaccinations_journal.sql | 116 +
.../dynamic/v21-clin-v_waiting_list.sql} | 63 +-
.../dynamic/v21-clin-vaccination-dynamic.sql | 196 +
.../dynamic/v21-dem-external_id-dynamic.sql} | 4 +-
.../v20-v21/dynamic/v21-dem-identity-dynamic.sql | 146 +
.../dynamic/v21-dem-org-trgm_idx.sql} | 2 +-
.../sql/v20-v21/dynamic/v21-dem-person_views.sql | 135 +
.../sql/v20-v21/dynamic/v21-dem-region-dynamic.sql | 634 +
.../sql/v20-v21/dynamic/v21-dem-staff-dynamic.sql | 141 +
.../sql/v20-v21/dynamic/v21-dem-v_basic_person.sql | 27 +
.../v20-v21/dynamic/v21-dem-v_pat_addresses.sql | 76 +
.../dynamic/v21-gm-db-translations-de_DE.sql | 434 +
server/sql/v20-v21/dynamic/v21-gm-md5.sql | 57 +
.../dynamic/v21-ref-paperwork_templates.sql | 138 +
.../sql/v20-v21/dynamic/v21-ref-v_auto_hints.sql | 405 +
.../v20-v21/dynamic/v21-release_notes-dynamic.sql | 114 +
.../gm_db-gnumed_v21-fingerprint.txt} | 134 +-
.../v20-v21/python/v21-import-form-templates.py | 64 +
.../python/v21-import-plot-scripts.py} | 8 +-
.../static/v21-blobs-doc_med-static.sql} | 7 +-
.../static/v21-clin-substance_intake-static.sql} | 15 +-
.../static/v21-dem-identity-static.sql} | 20 +-
.../static/v21-dem-region-static.sql} | 17 +-
.../static/v21-ref-auto_hint-static.sql} | 11 +-
.../superuser/v21-reinstall-pg_trgm.sql} | 2 +-
140 files changed, 54165 insertions(+), 27635 deletions(-)
copy server/bootstrap/{fixup_db-v20.conf => fixup_db-v21.conf} (76%)
create mode 100644 server/bootstrap/update_db-v20_v21.conf
copy server/doc/{gm-backup_database.8 => gm-backup.8} (58%)
create mode 100644 server/doc/gm-restore_database_from_archive.8
rename {debian/conf => server/etc/gnumed}/gnumed-restore.conf (83%)
delete mode 100644 server/etc/gnumed/gnumed-restore.conf.example
copy server/{gm-backup_database.sh => gm-backup.sh} (86%)
copy server/{gm-restore_database.sh => gm-restore_database_from_archive.sh} (60%)
delete mode 100644 server/pycommon/gmConfigCommon.py
copy server/sql/{v17-v18/static/v18-bill-bill-static.sql => v19-v20/fixups/v20-clin-procedure-fixup.sql} (66%)
copy server/sql/{v19-v20/data/v20-Begleitbrief.tex => v20-v21/data/v21-Begleitbrief.tex} (95%)
create mode 100644 server/sql/v20-v21/data/v21-Medikationsplan_AMTS-2.0-nicht_konform.tex
create mode 100644 server/sql/v20-v21/data/v21-Medikationsplan_AMTS-2.0.tex
copy server/sql/{v18-v19/data/v19-GNUmed-default_medication_list_template.tex => v20-v21/data/v21-aktuelle-Medikationsliste.tex} (72%)
create mode 100644 server/sql/v20-v21/data/v21-gm2gpl-plot_one_test.gpl
create mode 100644 server/sql/v20-v21/data/v21-gm2gpl-plot_two_tests.gpl
create mode 100644 server/sql/v20-v21/dynamic/v21-HIT_risk.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-audit-constraints.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-blobs-doc_med-dynamic.sql
copy server/sql/{v9-v10/dynamic/v10-blobs-v_doc_desc.sql => v20-v21/dynamic/v21-blobs-v_doc_desc.sql} (57%)
create mode 100644 server/sql/v20-v21/dynamic/v21-blobs-v_doc_med_journal.sql
copy server/sql/{v9-v10/dynamic/v10-blobs-v_latest_mugshot.sql => v20-v21/dynamic/v21-blobs-v_latest_mugshot.sql} (70%)
copy server/sql/{v9-v10/dynamic/v10-blobs-v_obj4doc_no_data.sql => v20-v21/dynamic/v21-blobs-v_obj4doc_no_data.sql} (50%)
copy server/sql/{v9-v10/dynamic/v10-blobs-v_reviewed_doc_objects.sql => v20-v21/dynamic/v21-blobs-v_reviewed_doc_objects.sql} (71%)
copy server/sql/{v19-v20/dynamic/v20-cfg-cfg_str_array-dynamic.sql => v20-v21/dynamic/v21-cfg-cfg_str_array-dynamic.sql} (67%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-procedure-dynamic.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-sanity_checks.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-substance_intake-dynamic.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_edc_journal.sql
copy server/sql/{v19-v20/dynamic/v20-clin-v_emr_journal.sql => v20-v21/dynamic/v21-clin-v_emr_journal.sql} (81%)
copy server/sql/{v19-v20/dynamic/v20-clin-v_export_items.sql => v20-v21/dynamic/v21-clin-v_export_items.sql} (89%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_external_care_journal.sql
copy server/sql/{v15-v16/dynamic/v16-clin-v_family_history_journal.sql => v20-v21/dynamic/v21-clin-v_family_history_journal.sql} (65%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_health_issues_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_hospital_stays_journal.sql
copy server/sql/{v19-v20/dynamic/v20-clin-v_narrative4search.sql => v20-v21/dynamic/v21-clin-v_narrative4search.sql} (93%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_pat_allergies_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_pat_allergy_state_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_pat_encounters_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_pat_episodes_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_pat_narrative_journal.sql
copy server/sql/{v18-v19/dynamic/v19-clin-v_procedures_journal.sql => v20-v21/dynamic/v21-clin-v_procedures_journal.sql} (60%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_reminders_journal.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_substance_intake4narrative_search.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_substance_intake_journal.sql
copy server/sql/{v18-v19/dynamic/v19-clin-v_substance_intakes.sql => v20-v21/dynamic/v21-clin-v_substance_intakes.sql} (51%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_suppressed_hints.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_suppressed_hints_journal.sql
copy server/sql/{v19-v20/dynamic/v20-clin-v_test_results_journal.sql => v20-v21/dynamic/v21-clin-v_test_results_journal.sql} (72%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-v_vaccinations_journal.sql
copy server/sql/{v15-v16/fixups/v16-clin-v_waiting_list-fixup.sql => v20-v21/dynamic/v21-clin-v_waiting_list.sql} (55%)
create mode 100644 server/sql/v20-v21/dynamic/v21-clin-vaccination-dynamic.sql
copy server/sql/{v17-v18/static/v18-clin-lnk_ttype2unified_type-static.sql => v20-v21/dynamic/v21-dem-external_id-dynamic.sql} (75%)
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-identity-dynamic.sql
copy server/sql/{v19-v20/fixups/v20-dem-org-idx-fixup.sql => v20-v21/dynamic/v21-dem-org-trgm_idx.sql} (92%)
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-person_views.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-region-dynamic.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-staff-dynamic.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-v_basic_person.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-dem-v_pat_addresses.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-gm-db-translations-de_DE.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-gm-md5.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-ref-paperwork_templates.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-ref-v_auto_hints.sql
create mode 100644 server/sql/v20-v21/dynamic/v21-release_notes-dynamic.sql
copy server/sql/{v19-v20/gm_db-gnumed_v20-fingerprint.txt => v20-v21/gm_db-gnumed_v21-fingerprint.txt} (86%)
create mode 100644 server/sql/v20-v21/python/v21-import-form-templates.py
copy server/sql/{v15-v16/python/v16-import-plot-scripts.py => v20-v21/python/v21-import-plot-scripts.py} (78%)
copy server/sql/{v18-v19/static/v19-clin-hospital_stay-static.sql => v20-v21/static/v21-blobs-doc_med-static.sql} (72%)
copy server/sql/{v17-v18/static/v18-dem-staff-static.sql => v20-v21/static/v21-clin-substance_intake-static.sql} (55%)
copy server/sql/{v17-v18/static/v18-dem-staff-static.sql => v20-v21/static/v21-dem-identity-static.sql} (57%)
copy server/sql/{v17-v18/static/v18-dem-staff-static.sql => v20-v21/static/v21-dem-region-static.sql} (57%)
copy server/sql/{v17-v18/static/v18-bill-bill-static.sql => v20-v21/static/v21-ref-auto_hint-static.sql} (67%)
copy server/sql/{v18-v19/superuser/v19-install-pg_trgm.sql => v20-v21/superuser/v21-reinstall-pg_trgm.sql} (90%)
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