[med-svn] r21880 - in trunk/packages/R/r-bioc-xvector/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2016-05-08 17:04:44 +0000 (Sun, 08 May 2016)
New Revision: 21880

Modified:
   trunk/packages/R/r-bioc-xvector/trunk/debian/changelog
   trunk/packages/R/r-bioc-xvector/trunk/debian/control
   trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch
Log:
New upstream version


Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-xvector/trunk/debian/changelog	2016-05-08 16:56:39 UTC (rev 21879)
+++ trunk/packages/R/r-bioc-xvector/trunk/debian/changelog	2016-05-08 17:04:44 UTC (rev 21880)
@@ -1,8 +1,10 @@
-r-bioc-xvector (0.10.0-2) UNRELEASED; urgency=medium
+r-bioc-xvector (0.12.0-1) unstable; urgency=medium
 
+  * New upstream version
   * Fix versioned Depends
+  * cme fix dpkg-control
 
- -- Andreas Tille <tille at debian.org>  Fri, 30 Oct 2015 13:06:11 +0100
+ -- Andreas Tille <tille at debian.org>  Sun, 08 May 2016 18:59:00 +0200
 
 r-bioc-xvector (0.10.0-1) unstable; urgency=medium
 

Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-xvector/trunk/debian/control	2016-05-08 16:56:39 UTC (rev 21879)
+++ trunk/packages/R/r-bioc-xvector/trunk/debian/control	2016-05-08 17:04:44 UTC (rev 21880)
@@ -7,9 +7,9 @@
 Build-Depends: debhelper (>= 9),
                cdbs,
                r-base-dev,
-               r-bioc-iranges (>= 2.4.0)
-Standards-Version: 3.9.6
-Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-xvector/trunk/
+               r-bioc-iranges (>= 2.6.0)
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-xvector/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-xvector/trunk/
 Homepage: http://www.bioconductor.org/packages/release/bioc/html/XVector.html
 
@@ -18,7 +18,7 @@
 Depends: ${R:Depends},
          ${misc:Depends},
          ${shlibs:Depends},
-         r-bioc-iranges (>= 2.4.0)
+         r-bioc-iranges (>= 2.6.0)
 Description: BioConductor representation and manpulation of external sequences
  This BioConductor package provides memory efficient S4 classes for storing
  sequences "externally" (behind an R external pointer, or on disk).

Modified: trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch
===================================================================
--- trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch	2016-05-08 16:56:39 UTC (rev 21879)
+++ trunk/packages/R/r-bioc-xvector/trunk/debian/patches/use_debian_packaged_zlib.patch	2016-05-08 17:04:44 UTC (rev 21880)
@@ -5,10 +5,10 @@
 
 --- a/DESCRIPTION
 +++ b/DESCRIPTION
-@@ -8,7 +8,7 @@ Maintainer: H. Pages <hpages at fredhutch.o
+@@ -9,7 +9,7 @@ Maintainer: Hervé Pagès <hpages at fredhu
  biocViews: Infrastructure, DataRepresentation
  Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.11.3), S4Vectors (>=
-         0.7.1), IRanges (>= 2.3.7)
+         0.9.29), IRanges (>= 2.5.27)
 -Imports: methods, zlibbioc, BiocGenerics, S4Vectors, IRanges
 +Imports: methods, BiocGenerics, S4Vectors, IRanges
  LinkingTo: S4Vectors, IRanges