[med-svn] r21917 - trunk/packages/R/r-bioc-rtracklayer/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-05-10 08:13:45 +0000 (Tue, 10 May 2016)
New Revision: 21917

Modified:
   trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog
   trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control
   trunk/packages/R/r-bioc-rtracklayer/trunk/debian/copyright
Log:
Add missing Build-Depends: libssl-dev; final clarification of license


Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog	2016-05-10 08:09:36 UTC (rev 21916)
+++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog	2016-05-10 08:13:45 UTC (rev 21917)
@@ -1,14 +1,12 @@
-r-bioc-rtracklayer (1.32.0-1) UNRELEASED; urgency=medium
+r-bioc-rtracklayer (1.32.0-1) unstable; urgency=medium
 
   * New upstream version
   * cme fix dpkg-control
+  * Add missing Build-Depends: libssl-dev
   * debian/copyright: Clarify license of files in src/ucsc/*
-    TODO: four remaining files containing explicit non-free licensing
-          statement (see #807580) but probably due to an error.  Asked
-          for clarification on GitHub
-             https://github.com/jstjohn/KentLib/issues/2
+    Closes: #807580
 
- -- Andreas Tille <tille at debian.org>  Mon, 09 May 2016 09:49:03 +0200
+ -- Andreas Tille <tille at debian.org>  Mon, 09 May 2016 12:46:31 +0200
 
 r-bioc-rtracklayer (1.30.1-1) unstable; urgency=medium
 

Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control	2016-05-10 08:09:36 UTC (rev 21916)
+++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/control	2016-05-10 08:13:45 UTC (rev 21917)
@@ -5,10 +5,11 @@
 Priority: optional
 Build-Depends: debhelper (>= 9),
                cdbs,
-               r-base-dev,
+               r-base-dev (>= 3.3),
                r-cran-xml,
                r-cran-rcurl,
-               r-bioc-genomicalignments (>= 1.6.0)
+               r-bioc-genomicalignments (>= 1.6.0),
+               libssl-dev
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-rtracklayer/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-rtracklayer/trunk/

Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/copyright	2016-05-10 08:09:36 UTC (rev 21916)
+++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/copyright	2016-05-10 08:13:45 UTC (rev 21917)
@@ -54,19 +54,25 @@
        src/ucsc/portable.h
        src/ucsc/sqlNum.*
        src/ucsc/wildcmp.c
+       src/ucsc/cheapcgi.h
+       src/ucsc/hmmstats.h
+       src/ucsc/portimpl.h
+       src/ucsc/sig.h
 Copyright: 2000-2005 Jim Kent
 License: all_use
  license is hereby granted for all use - public, private or commercial
-
-Files: src/ucsc/cheapcgi.h
+Comment: The files
+       src/ucsc/cheapcgi.h
        src/ucsc/hmmstats.h
        src/ucsc/portimpl.h
        src/ucsc/sig.h
-Copyright: 2000 Jim Kent
-License: non_commercial
- Source code may be freely used
- for personal, academic, and non-profit purposes.  Commercial use
- permitted only by explicit agreement with Jim Kent (jim_kent at pacbell.net)
+ in this source download do contain the statement:
+    Source code may be freely used
+    for personal, academic, and non-profit purposes.  Commercial use
+    permitted only by explicit agreement with Jim Kent (jim_kent at pacbell.net)
+ but the author Jim Kent declared publicly here
+    https://lists.alioth.debian.org/pipermail/debian-med-packaging/2016-May/042035.html
+ that this is not the proper license but the license above applies.
 
 Files: debian/*
 Copyright: 2013-2014 Andreas Tille <tille at debian.org>