[med-svn] [r-bioc-limma] 01/01: Commit patch by Gordon Ball <gordon at chronitis.net> fixing test suite

Andreas Tille tille at debian.org
Sat May 14 22:57:36 UTC 2016


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tille pushed a commit to branch master
in repository r-bioc-limma.

commit ba0ade6c802deb55d44385590e1aff2fb1534c90
Author: Andreas Tille <tille at debian.org>
Date:   Sun May 15 00:57:12 2016 +0200

    Commit patch by Gordon Ball <gordon at chronitis.net> fixing test suite
---
 debian/tests/run-unit-test | 8 +++-----
 1 file changed, 3 insertions(+), 5 deletions(-)

diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
index 20d0ccb..f5b64e9 100644
--- a/debian/tests/run-unit-test
+++ b/debian/tests/run-unit-test
@@ -6,12 +6,10 @@ if [ "$ADTTMP" = "" ] ; then
 fi
 cd $ADTTMP
 cp -a /usr/share/doc/${pkg}/tests/* $ADTTMP
-for test in *R.gz
+gunzip -r *
+for test in *.R
 do
-  zcat ${test} > `basename ${test} .gz`
-  LC_ALL=C R CMD BATCH `basename ${test} .gz`
-  LC_ALL=C R CMD Rdiff `basename ${test} .gz`out.save* `basename ${test} .gz`out
-  rm `basename ${test} .gz`out .RData
+  LC_ALL=C R --no-save < ${test}
 done
 rm -f $ADTTMP/*
 

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