[med-svn] [andi] 01/03: Merge tag 'upstream/0.10'

[Andreas Tille]

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tille pushed a commit to tag debian/0.10-1
in repository andi.

commit 65d52cf32c210aa68a897cc60c38b9d462b0d0d3
Merge: 3e3fb82 dad0e7a
Author: Andreas Tille <tille at debian.org>
Date:   Fri May 20 15:01:34 2016 +0200

    Merge tag 'upstream/0.10'
    
    Upstream version 0.10

 .travis.yml                 |  27 ++++++----
 README.md                   |  51 ++++++++++++-------
 andi-manual.pdf             | Bin 425545 -> 440783 bytes
 configure.ac                |   6 ++-
 docs/andi.1.in              |   8 +--
 docs/manual/andi-manual.tex | 105 +++++++++++++++++++++++++++++++-------
 docs/manual/references.bib  |  16 +++++-
 opt/strchrnul.c             |   2 +
 scripts/failed.zsh          |  20 ++++++++
 src/Makefile.am             |   1 +
 src/andi.c                  |  69 +++++++++++++++++++------
 src/dist_hack.h             |  13 ++---
 src/esa.c                   | 121 ++++++++++++++++++++------------------------
 src/esa.h                   |   3 +-
 src/global.h                |  13 +++++
 src/io.c                    |  31 +++++++-----
 src/model.c                 |  32 ++++++++----
 src/process.c               |  57 +++++++--------------
 src/process.h               |   2 +-
 src/sequence.c              |  46 +++++------------
 src/sequence.h              |  21 +++++---
 test/test_esa.c             |  13 ++---
 test/test_seq.c             |  27 ++++++----
 23 files changed, 425 insertions(+), 259 deletions(-)

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