[med-svn] [gubbins] branch master updated (157c76b -> 7dee080)

[Sascha Steinbiss]

This is an automated email from the git hooks/post-receive script.

satta pushed a change to branch master
in repository gubbins.

      from  157c76b   add patch headers
       new  99e8d84   New upstream version 2.2.0
       new  6e23c13   Merge tag 'upstream/2.2.0'
       new  7dee080   Debian version bump

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 CHANGELOG                                          |  4 ++++
 Dockerfile                                         | 19 +++++++++++++++++++
 README.md                                          | 10 +++++++++-
 VERSION                                            |  2 +-
 debian/changelog                                   |  7 +++++++
 python/gubbins/PreProcessFasta.py                  |  9 +++++++--
 python/gubbins/common.py                           |  2 +-
 python/gubbins/tests/test_external_dependancies.py |  1 +
 python/gubbins/tests/test_pre_process_fasta.py     | 22 ++++++++++++++++++----
 python/scripts/run_gubbins.py                      |  1 +
 10 files changed, 68 insertions(+), 9 deletions(-)
 create mode 100644 Dockerfile
 mode change 100644 => 100755 python/gubbins/tests/test_external_dependancies.py

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