[med-svn] [htslib] 02/06: Fixed out by one error in bin calculation (CRAM -> BAM).

[Andreas Tille]

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tille pushed a commit to branch debian/unstable
in repository htslib.

commit 9c230e7c9162fb1632ca03bc5c8f34345eddfca2
Author: James Bonfield <jkb at sanger.ac.uk>
Date:   Tue May 17 15:17:32 2016 +0100

    Fixed out by one error in bin calculation (CRAM -> BAM).
    
    Fixes samtools/samtools#574
    
    (cherry picked from commit e5ab99785bb8ec5a5054d6c6a2c432bdd8ee5ef1)
---
 cram/cram_samtools.c | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/cram/cram_samtools.c b/cram/cram_samtools.c
index 9e95c7b..60a7b5f 100644
--- a/cram/cram_samtools.c
+++ b/cram/cram_samtools.c
@@ -90,7 +90,7 @@ int bam_construct_seq(bam_seq_t **bp, size_t extra_len,
 
     b->core.tid     = rname;
     b->core.pos     = pos-1;
-    b->core.bin     = bam_reg2bin(pos, end);
+    b->core.bin     = bam_reg2bin(pos-1, end);
     b->core.qual    = mapq;
     b->core.l_qname = qname_len+1;
     b->core.flag    = flag;

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