[med-svn] [htslib] annotated tag 1.3.2 created (now 80338a3)

[Andreas Tille]

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tille pushed a change to annotated tag 1.3.2
in repository htslib.

        at  80338a3   (tag)
   tagging  6bed35a3eaefa3baa2c7e0166ceba442212f166b (commit)
  replaces  1.3.1
 tagged by  John Marshall
        on  Tue Sep 13 07:51:40 2016 +0100

- Log -----------------------------------------------------------------
HTSlib patch release 1.3.2: bin bug fix, RTLD_GLOBAL plugins

* Corrected bin calculation when converting directly from CRAM to BAM.
  Previously a small fraction of converted reads would fail Picard's
  validation with "bin field of BAM record does not equal value computed"
  (SAMtools issue #574).

* Plugins can now signal to HTSlib which of RTLD_LOCAL and RTLD_GLOBAL
  they wish to be opened with -- previously they were always RTLD_LOCAL.

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James Bonfield (1):
      Fixed out by one error in bin calculation (CRAM -> BAM).

John Marshall (5):
      Merge version number bump and NEWS file from master
      Use internal plain char isdigit_c()/etc ctype functions
      Allow plugins to select RTLD_LOCAL or RTLD_GLOBAL
      Provide a fallback for PATH_MAX if it is not defined
      Release 1.3.2: bin field bug fix, RTLD_GLOBAL plugins

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No new revisions were added by this update.

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