[med-svn] [seqan2] 05/05: Try patch from upstream to fix kfreebsd/hurd builds

[Michael Crusoe]

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misterc-guest pushed a commit to branch debian-experimental
in repository seqan2.

commit 275acf830b4a801afc6e62a25bae85809b77aa8b
Author: Michael R. Crusoe <michael.crusoe at gmail.com>
Date:   Mon Oct 10 06:55:47 2016 -0700

    Try patch from upstream to fix kfreebsd/hurd builds
---
 debian/changelog               | 6 ++++++
 debian/patches/pthread-linking | 5 ++++-
 2 files changed, 10 insertions(+), 1 deletion(-)

diff --git a/debian/changelog b/debian/changelog
index be190bc..d9c9efe 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,9 @@
+seqan2 (2.2.0+dfsg-3~test) unstable; urgency=medium
+
+  * Try patch from upstream to fix kfreebsd/hurd builds
+
+ -- Michael R. Crusoe <michael.crusoe at gmail.com>  Mon, 10 Oct 2016 06:52:15 -0700
+
 seqan2 (2.2.0+dfsg-3) unstable; urgency=medium
 
   * Fix arch specific build. Closes: #840023
diff --git a/debian/patches/pthread-linking b/debian/patches/pthread-linking
index 9d07ca6..75f46e8 100644
--- a/debian/patches/pthread-linking
+++ b/debian/patches/pthread-linking
@@ -1,3 +1,6 @@
+Author: Michael R. Crusoe <michael.crusoe at gmail.com>
+Description: Try patch from upstream to fix kfreebsd/hurd builds
+Forwarded: https://github.com/seqan/seqan/issues/1861#issuecomment-252621210
 --- seqan2.orig/util/cmake/FindSeqAn.cmake
 +++ seqan2/util/cmake/FindSeqAn.cmake
 @@ -287,7 +287,7 @@
@@ -5,7 +8,7 @@
  # librt, libpthread -- implicit, on Linux only
  
 -if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux")
-+if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux") || (${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD") || (${CMAKE_SYSTEM_NAME} STREQUAL "GNU") 
++if ((${CMAKE_SYSTEM_NAME} STREQUAL "Linux") OR (${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD") OR (${CMAKE_SYSTEM_NAME} STREQUAL "GNU"))
    set (SEQAN_LIBRARIES ${SEQAN_LIBRARIES} rt pthread)
  elseif ((${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD") OR (${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD"))
    set (SEQAN_LIBRARIES ${SEQAN_LIBRARIES} pthread)

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