[med-svn] [daligner] 02/02: Merge tag 'upstream/1.0+20160927'

[Afif Elghraoui]

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afif pushed a commit to branch master
in repository daligner.

commit a3c1e768ea2b870655064519ef89c49ceceb9573
Merge: 47ddfce 3e9ce55
Author: Afif Elghraoui <afif at debian.org>
Date:   Mon Oct 10 06:49:51 2016 -0700

    Merge tag 'upstream/1.0+20160927'
    
    Upstream version 1.0+20160927

 DB.c                    |   86 ++-
 DB.h                    |   28 +-
 HPC.daligner.c          | 1399 +++++++++++++++++++++++++++++++++++++++++++++++
 HPCdaligner.c           |  543 ------------------
 HPCmapper.c             |  591 --------------------
 LAcat.c                 |   53 +-
 LAcheck.c               |   95 +++-
 LAdump.c                |   13 +-
 LAmerge.c               |   58 +-
 LAshow.c                |   78 ++-
 LAsort.c                |   83 ++-
 LAsplit.c               |   51 +-
 LAupgrade.Dec.31.2014.c |  153 ------
 Makefile                |   15 +-
 QV.c                    |   56 +-
 QV.h                    |   18 +-
 README                  |  395 -------------
 README.md               |  506 +++++++++++++++++
 align.c                 |  165 ++++--
 align.h                 |   23 +-
 daligner.c              |  102 +++-
 filter.c                |  348 +++++++-----
 filter.h                |    5 +-
 23 files changed, 2801 insertions(+), 2063 deletions(-)

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