[med-svn] [plink1.9] 01/01: Remove d/NEWS.Debian, redundant with d/README.Debian
Dylan Aïssi
bob.dybian-guest at moszumanska.debian.org
Mon Oct 24 20:53:59 UTC 2016
This is an automated email from the git hooks/post-receive script.
bob.dybian-guest pushed a commit to branch master
in repository plink1.9.
commit 7a28525d028d33002e4ef09527bb70046287adf4
Author: Dylan Aïssi <bob.dybian at gmail.com>
Date: Mon Oct 24 22:48:53 2016 +0200
Remove d/NEWS.Debian, redundant with d/README.Debian
---
debian/NEWS.Debian | 35 -----------------------------------
debian/README.Debian | 42 +++++-------------------------------------
debian/changelog | 3 ++-
debian/control | 2 +-
4 files changed, 8 insertions(+), 74 deletions(-)
diff --git a/debian/NEWS.Debian b/debian/NEWS.Debian
deleted file mode 100644
index 090b6db..0000000
--- a/debian/NEWS.Debian
+++ /dev/null
@@ -1,35 +0,0 @@
-Name conflict with plink1, plink1.9, plink2 and plink from ssh clone putty
-=============================================
-
-We are facing a name clash in the Free Software universe and we have
-to circumvent. To summarize, we have:
-
- 1. The plink1 executable
- /usr/lib/debian-med/bin/plink
- 1.1 A symbolic link to the plink1 executable
- /usr/bin/plink1
- /usr/bin/p-link
- /usr/lib/plink/plink
-
- 2. The plink1.9 executable
- /usr/lib/debian-med/bin/plink1.9
- 2.1 A symbolic link to the plink1.9 executable
- /usr/bin/plink1.9
-
- 3. The plink2 executable
- /usr/lib/debian-med/bin/plink2
- 3.1 A symbolic link to the plink2 executable
- /usr/bin/plink2
-
- 4. The plink executable (from putty)
- /usr/bin/plink
-
-So if you want to use plink1 with its original name just do the
-following: Set the PATH variable like
-
- export PATH=/usr/lib/debian-med/bin:$PATH
-
-This makes sure that scripts you are using will find the correct plink executable.
-
- -- Andreas Tille <tille at debian.org> Tue, 31 Mar 2009 22:28:25 +0200
- -- Dylan Aïssi <bob.dybian at gmail.com> Thu, 22 Jan 2015 08:00:59 +0100
diff --git a/debian/README.Debian b/debian/README.Debian
index 5e42e05..8c514e8 100644
--- a/debian/README.Debian
+++ b/debian/README.Debian
@@ -1,53 +1,21 @@
-plink for Debian
-----------------
-
-plink is a very fine piece of software and the world should thank
-the authors for their efforts. plink knows how to interact
-with gplink and haploview. The packaging of the latter is already
-being prepared. The prior still seeks a maintainer.
-
-Users of plink may also be interested in other packages the that
-Debian-Med.alioth.debian.org community has brought ot Debian,
-e.g. r-cran-qtl and general packages for bioinformatics research.
-
-
-Name conflict with plink1, plink1.9, plink2 and plink from ssh clone putty
+Name conflict with plink1, plink1.9 and plink from ssh clone putty
=============================================
-At http://bugs.debian.org/503367 and http://bugs.debian.org/771154#25
-you can read the full discussion about a name clash between one
-component of the frequently used ssh software putty and plink.
-The short story is: We are facing a name clash in the Free Software
-universe and we have to circumvent this somehow. Following the
-arguing in the bug discussion the plink package has to do the name
-change. To summarize, we have:
+We are facing a name clash in the Free Software universe and we have
+to circumvent. To summarize, we have:
1. The plink1 executable
/usr/lib/debian-med/bin/plink
1.1 A symbolic link to the plink1 executable
/usr/bin/plink1
/usr/bin/p-link
- /usr/lib/plink/plink
2. The plink1.9 executable
/usr/lib/debian-med/bin/plink1.9
2.1 A symbolic link to the plink1.9 executable
/usr/bin/plink1.9
- 3. The plink2 executable
- /usr/lib/debian-med/bin/plink2
- 3.1 A symbolic link to the plink2 executable
- /usr/bin/plink2
-
- 4. The plink executable (from putty)
+ 3. The plink executable (from putty)
/usr/bin/plink
-So if you want to use plink1 with its original name just do the
-following: Set the PATH variable like
-
- export PATH=/usr/lib/debian-med/bin:$PATH
-
-This makes sure that scripts you are using will find the correct plink executable.
-
- -- Andreas Tille <tille at debian.org> Tue, 31 Mar 2009 22:28:25 +0200
- -- Dylan Aïssi <bob.dybian at gmail.com> Thu, 22 Jan 2015 08:00:59 +0100
+ -- Dylan Aïssi <bob.dybian at gmail.com> Mon, 24 Oct 2016 22:47:36 +0200
diff --git a/debian/changelog b/debian/changelog
index 442def9..0b60b05 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -4,8 +4,9 @@ plink1.9 (1.90~b3.43-161010-1) UNRELEASED; urgency=medium
* Update license of plink1.9 from GPL-3 to GPL-3+.
* Install an upstream changelog.
* Remove 03_Fix_FTBFS_GCC6.patch, fixed upstream.
+ * Remove d/NEWS.Debian, redundant with d/README.Debian.
- -- Dylan Aïssi <bob.dybian at gmail.com> Sun, 23 Oct 2016 23:58:01 +0200
+ -- Dylan Aïssi <bob.dybian at gmail.com> Mon, 24 Oct 2016 22:47:36 +0200
plink1.9 (1.90~b3.40-160816-2) unstable; urgency=medium
diff --git a/debian/control b/debian/control
index 87c35d4..e159419 100644
--- a/debian/control
+++ b/debian/control
@@ -32,4 +32,4 @@ Description: whole-genome association analysis toolset
.
Please note: The executable was renamed to plink1.9
because of a name clash. Please read more about this
- in /usr/share/doc/README.Debian.
+ in /usr/share/doc/plink1.9/README.Debian.
--
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