[med-svn] r22903 - trunk/packages/R/r-bioc-genomicranges/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-10-26 13:15:55 +0000 (Wed, 26 Oct 2016)
New Revision: 22903

Modified:
   trunk/packages/R/r-bioc-genomicranges/trunk/debian/changelog
   trunk/packages/R/r-bioc-genomicranges/trunk/debian/control
   trunk/packages/R/r-bioc-genomicranges/trunk/debian/copyright
   trunk/packages/R/r-bioc-genomicranges/trunk/debian/rules
Log:
  * New upstream version
  * Convert to dh-r
  * Generic BioConductor homepage



Modified: trunk/packages/R/r-bioc-genomicranges/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-genomicranges/trunk/debian/changelog	2016-10-26 12:29:09 UTC (rev 22902)
+++ trunk/packages/R/r-bioc-genomicranges/trunk/debian/changelog	2016-10-26 13:15:55 UTC (rev 22903)
@@ -1,3 +1,11 @@
+r-bioc-genomicranges (1.26.1-1) unstable; urgency=medium
+
+  * New upstream version
+  * Convert to dh-r
+  * Generic BioConductor homepage
+
+ -- Andreas Tille <tille at debian.org>  Wed, 26 Oct 2016 15:08:11 +0200
+
 r-bioc-genomicranges (1.24.0-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-genomicranges/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-genomicranges/trunk/debian/control	2016-10-26 12:29:09 UTC (rev 22902)
+++ trunk/packages/R/r-bioc-genomicranges/trunk/debian/control	2016-10-26 13:15:55 UTC (rev 22903)
@@ -2,10 +2,9 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
-Testsuite: autopkgtest
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               cdbs,
+               dh-r,
                r-base-dev,
                r-bioc-genomeinfodb (>= 1.4.0),
                r-bioc-biocgenerics (>= 0.16.1),
@@ -13,17 +12,15 @@
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicranges/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicranges/trunk/
-Homepage: http://bioconductor.org/packages/release/bioc/html/GenomicRanges.html
+Homepage: https://bioconductor.org/packages/GenomicRanges/
 
 Package: r-bioc-genomicranges
 Architecture: any
 Depends: ${R:Depends},
          ${shlibs:Depends},
          ${misc:Depends},
-         r-bioc-genomeinfodb (>= 1.4.0),
-         r-bioc-biocgenerics (>= 0.16.1),
-         r-bioc-xvector (>= 0.12.0)
-Recommends: r-cran-digest
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: BioConductor representation and manipulation of genomic intervals
  The ability to efficiently store genomic annotations and alignments is
  playing a central role when it comes to analyze high-throughput

Modified: trunk/packages/R/r-bioc-genomicranges/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-genomicranges/trunk/debian/copyright	2016-10-26 12:29:09 UTC (rev 22902)
+++ trunk/packages/R/r-bioc-genomicranges/trunk/debian/copyright	2016-10-26 13:15:55 UTC (rev 22903)
@@ -1,15 +1,15 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: GenomicRanges
 Upstream-Contact: Bioconductor Package Maintainer <maintainer at bioconductor.org>
-Source: http://www.bioconductor.org/packages/release/bioc/html/GenomicRanges.html
+Source: https://bioconductor.org/packages/GenomicRanges/
 
 Files: *
-Copyright: © 2006-2014 P. Aboyoun, H. Pages and M. Lawrence
+Copyright: © 2006-2016 P. Aboyoun, H. Pages and M. Lawrence
 License: Artistic-2.0
 
 
 Files: debian/*
-Copyright: 2013-2014 Andreas Tille <tille at debian.org>
+Copyright: 2013-2016 Andreas Tille <tille at debian.org>
 License: Artistic-2.0
 
 License: Artistic-2.0

Modified: trunk/packages/R/r-bioc-genomicranges/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-genomicranges/trunk/debian/rules	2016-10-26 12:29:09 UTC (rev 22902)
+++ trunk/packages/R/r-bioc-genomicranges/trunk/debian/rules	2016-10-26 13:15:55 UTC (rev 22903)
@@ -1,4 +1,4 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R