[med-svn] r22905 - trunk/packages/R/r-bioc-affy/trunk/debian

[Andreas Tille]

Author: tille
Date: 2016-10-26 13:38:02 +0000 (Wed, 26 Oct 2016)
New Revision: 22905

Modified:
   trunk/packages/R/r-bioc-affy/trunk/debian/changelog
   trunk/packages/R/r-bioc-affy/trunk/debian/control
   trunk/packages/R/r-bioc-affy/trunk/debian/copyright
   trunk/packages/R/r-bioc-affy/trunk/debian/rules
Log:
  * New upstream version
  * Convert to dh-r
  * Generic BioConductor homepage



Modified: trunk/packages/R/r-bioc-affy/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-affy/trunk/debian/changelog	2016-10-26 13:17:15 UTC (rev 22904)
+++ trunk/packages/R/r-bioc-affy/trunk/debian/changelog	2016-10-26 13:38:02 UTC (rev 22905)
@@ -1,3 +1,11 @@
+r-bioc-affy (1.52.0-1) unstable; urgency=medium
+
+  * New upstream version
+  * Convert to dh-r
+  * Generic BioConductor homepage
+
+ -- Andreas Tille <tille at debian.org>  Wed, 26 Oct 2016 15:31:37 +0200
+
 r-bioc-affy (1.50.0-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-affy/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-affy/trunk/debian/control	2016-10-26 13:17:15 UTC (rev 22904)
+++ trunk/packages/R/r-bioc-affy/trunk/debian/control	2016-10-26 13:38:02 UTC (rev 22905)
@@ -2,10 +2,9 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
-Testsuite: autopkgtest
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               cdbs,
+               dh-r,
                r-base-dev,
                r-bioc-biobase (>= 2.26.0),
                r-bioc-affyio (>= 1.34.0),
@@ -14,17 +13,15 @@
 Standards-Version: 3.9.8
 Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-affy/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-affy/trunk/
-Homepage: http://bioconductor.org/packages/release/bioc/html/affy.html
+Homepage: https://bioconductor.org/packages/affy/
 
 Package: r-bioc-affy
 Architecture: any
 Depends: ${R:Depends},
          ${misc:Depends},
          ${shlibs:Depends},
-         r-bioc-biobase (>= 2.26.0),
-         r-bioc-affyio (>= 1.34.0),
-         r-bioc-biocinstaller (>= 1.16.0),
-         r-bioc-preprocesscore (>= 1.28.0)
+Recommends: ${R:Recommends}
+Suggests: ${R:Suggests}
 Description: BioConductor methods for Affymetrix Oligonucleotide Arrays
  This is part of the BioConductor GNU R suite.  The package contains
  functions for exploratory oligonucleotide array analysis. 

Modified: trunk/packages/R/r-bioc-affy/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-affy/trunk/debian/copyright	2016-10-26 13:17:15 UTC (rev 22904)
+++ trunk/packages/R/r-bioc-affy/trunk/debian/copyright	2016-10-26 13:38:02 UTC (rev 22905)
@@ -1,17 +1,17 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: affy
-Upstream-Contact: Rafael A. Irizarry <rafa at jhu.edu>
-Source: http://www.bioconductor.org/packages/release/bioc/html/affy.html
+Upstream-Contact: Rafael A. Irizarry <rafa at jhu.edu>
+Source: https://bioconductor.org/packages/affy/
 
 Files: *
-Copyright: © 2006-2013 Rafael A. Irizarry <rafa at jhu.edu>,
-                       Laurent Gautier <lgautier at gmail.com>,
-                       Benjamin Milo Bolstad <bmb at bmbolstad.com>,
-                       Crispin Miller <cmiller at picr.man.ac.uk>
+Copyright: © 2006-2016 Rafael A. Irizarry <rafa at jhu.edu>,
+                       Laurent Gautier <lgautier at gmail.com>,
+                       Benjamin Milo Bolstad <bmb at bmbolstad.com>,
+                       Crispin Miller <cmiller at picr.man.ac.uk>
 License: Artistic-2.0
 
 Files: debian/*
-Copyright: 2013 Andreas Tille <tille at debian.org>
+Copyright: 2013-2016 Andreas Tille <tille at debian.org>
 License: Artistic-2.0
 
 License: Artistic-2.0

Modified: trunk/packages/R/r-bioc-affy/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-affy/trunk/debian/rules	2016-10-26 13:17:15 UTC (rev 22904)
+++ trunk/packages/R/r-bioc-affy/trunk/debian/rules	2016-10-26 13:38:02 UTC (rev 22905)
@@ -1,4 +1,4 @@
 #!/usr/bin/make -f
 
-debRreposname=bioc
-include /usr/share/R/debian/r-cran.mk
+%:
+	dh $@ --buildsystem R