[med-svn] [seqsero] 03/03: Rename batch script and add more verbose usage message

Andreas Tille tille at debian.org
Tue Apr 4 07:38:27 UTC 2017


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tille pushed a commit to branch master
in repository seqsero.

commit ee61617fae321e07258e13885c76024fe9aa9dc1
Author: Andreas Tille <tille at debian.org>
Date:   Tue Apr 4 09:29:07 2017 +0200

    Rename batch script and add more verbose usage message
---
 debian/bin/{seqsero_batch => seqsero_batch_pair-end} | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/debian/bin/seqsero_batch b/debian/bin/seqsero_batch_pair-end
similarity index 82%
rename from debian/bin/seqsero_batch
rename to debian/bin/seqsero_batch_pair-end
index eb82828..f94250e 100755
--- a/debian/bin/seqsero_batch
+++ b/debian/bin/seqsero_batch_pair-end
@@ -1,7 +1,13 @@
 #!/bin/sh
 
 if [ $# != 1 ] ; then
-    echo "Usage: `basename $0` <dir_with_sequence_pairs>"
+    cat <<EOT
+Usage: `basename $0` <dir_with_sequence_pairs>
+
+This script seeks a directory for paired-end reads and processes
+all pairs through seqsero using -m2 option.  If a sequence pair
+was processed before it will be skipped.
+EOT
     exit
 fi
 

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