[med-svn] [psortb] 01/04: Remove copies of biosquid - possibly an old version drained from an old version of hmmer2

[Andreas Tille]

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tille pushed a commit to branch master
in repository psortb.

commit 1cee4633021e8932c6df897e195d3f48b9ab5a23
Author: Andreas Tille <tille at debian.org>
Date:   Wed Apr 5 14:19:56 2017 +0200

    Remove copies of biosquid - possibly  an old version drained from an old version of hmmer2
---
 debian/changelog | 2 +-
 debian/copyright | 8 ++++++++
 debian/watch     | 3 ++-
 3 files changed, 11 insertions(+), 2 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 8e121d4..43a6aa7 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,4 +1,4 @@
-psortb (3.0.4-1) UNRELEASED; urgency=medium
+psortb (3.0.4+dfsg-1) UNRELEASED; urgency=medium
 
   * Initial release (Closes: #<bug>)
 
diff --git a/debian/copyright b/debian/copyright
index 16c4ed9..e6b4baf 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,6 +1,14 @@
 Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: PSORTb:
 Source: http://www.psort.org/downloads
+Files-Excluded: algorithm-hmm/src/include/gki.h
+                algorithm-hmm/src/include/msa.h
+                algorithm-hmm/src/include/rk.h
+                algorithm-hmm/src/include/sqfuncs.h
+                algorithm-hmm/src/include/squidconf.h
+                algorithm-hmm/src/include/squid.h
+                algorithm-hmm/src/include/ssi.h
+                algorithm-hmm/src/include/stopwatch.h
 
 Files: *
 Copyright: 2003-2010 Nancy Y. Yu, James R. Wagner, Matthew R. Laird,
diff --git a/debian/watch b/debian/watch
index f679bd6..0559297 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,3 +1,4 @@
 version=4
 
-http://www.psort.org/downloads .*/bio-tools-psort-all.(\d[.\d]+)\.tar\.gz
+opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
+  http://www.psort.org/downloads .*/bio-tools-psort-all.(\d[.\d]+)\.tar\.gz

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