[med-svn] [bandage] 01/02: control file updated
Cédric Lood
milt0n-guest at moszumanska.debian.org
Tue Aug 15 10:08:52 UTC 2017
This is an automated email from the git hooks/post-receive script.
milt0n-guest pushed a commit to branch master
in repository bandage.
commit 75371a668dfd941c5f76645a3e46830513e44d0f
Author: Cedric L <cedric.lood at kuleuven.be>
Date: Tue Aug 15 09:59:32 2017 +0200
control file updated
---
debian/changelog | 5 +++++
debian/compat | 1 +
debian/control | 19 +++++++++++++++++
debian/copyright | 16 ++++++++++++++
debian/doc-base | 20 ++++++++++++++++++
debian/get-orig-source | 55 ++++++++++++++++++++++++++++++++++++++++++++++++
debian/rules | 22 +++++++++++++++++++
debian/source/format | 1 +
debian/upstream/metadata | 12 +++++++++++
debian/watch | 55 ++++++++++++++++++++++++++++++++++++++++++++++++
10 files changed, 206 insertions(+)
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..414e6d9
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+<pkg> (<version>-1) UNRELEASED; urgency=medium
+
+ * Initial release (Closes: #<bug>)
+
+ -- DMPT <debian-med-packaging at lists.alioth.debian.org> `date -R`
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..f599e28
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+10
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..ef374ba
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,19 @@
+Source: bandage
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Cédric Lood <cedric.lood at kuleuven.be>
+Section: science
+Priority: optional
+Build-Depends: debhelper (>= 10)
+Standards-Version: 3.9.8
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/bandage.git
+Vcs-Git: https://anonscm.debian.org/git/debian-med/bandage.git
+Homepage: https://rrwick.github.io/Bandage
+
+Package: bandage
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Description: Bioinformatics Application for Navigating De novo Assembly Graphs Easily
+ Bandage is a program for visualising de novo assembly graphs. By
+ displaying connections which are not present in the contigs file,
+ Bandage opens up new possibilities for analysing de novo assemblies.
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..0ca1092
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,16 @@
+Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: <pkg>
+Source: <path_to_download>
+Comment: **** Before manually editing this file you should give ****
+ scan-copyrights
+ **** available in cme + lib-config-model-dpkg-perl ****
+ **** package a try. For existing copyright files try ****
+ cme update dpkg-copyright
+
+Files: *
+Copyright: © 20xx-20yy <upstream>
+License: <license>
+
+Files: debian/*
+Copyright: © 2017 maintainername <maintainer at e.mail>
+License: <license>
diff --git a/debian/doc-base b/debian/doc-base
new file mode 100644
index 0000000..5e7e1d4
--- /dev/null
+++ b/debian/doc-base
@@ -0,0 +1,20 @@
+Document: <pkg>
+Title: <title for this doc>
+Author: <author of this doc>
+Abstract: <if you have no better clue the short and
+ long description from debian/control might fit here as well>
+Section: Science/{Biology,Medicine} # see /usr/share/doc/doc-base/doc-base.txt.gz "2.3.3. The `section' field"
+
+# pick one of the below options
+Format: Text
+Files: /usr/share/doc/<pkg>/<pkg>.txt.gz
+
+Format: html
+Index: /usr/share/doc/<pkg>/html/index.html
+Files: /usr/share/doc/<pkg>/html/*
+
+Format: pdf
+Files: /usr/share/doc/<pkg>/<pkg>.pdf.gz
+
+Format: postscript
+Files: /usr/share/doc/<pkg>/<pkg>.ps.gz
diff --git a/debian/get-orig-source b/debian/get-orig-source
new file mode 100755
index 0000000..2aa782f
--- /dev/null
+++ b/debian/get-orig-source
@@ -0,0 +1,55 @@
+#!/bin/sh
+# if you need to repack for whatever reason you can
+# use this script via uscan or directly
+#
+# FIXME: currently the code is not conform to Debian Policy
+# http://www.debian.org/doc/debian-policy/ch-source.html
+# "get-orig-source (optional)"
+# This target may be invoked in any directory, ...
+# --> currently it is assumed the script is called in the
+# source directory featuring the debian/ dir
+
+# Excluding files and repacking archives
+# --------------------------------------
+# See also mk-origtargz(1) and the --repack option to uscan(1), which
+# honor the Files-Excluded list in debian/copyright.
+# That may be all you need, especially since the repack option can be set
+# in debian/watch.
+
+# For an example how to fetch source from sourceforge SVN see
+# https://anonscm.debian.org/git/debian-med/kmer-tools.git
+
+COMPRESS=xz
+
+set -e
+NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
+
+if ! echo $@ | grep -q upstream-version ; then
+ VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/\([0-9\.]\+\)-[0-9]\+$/\1/'`
+ uscan --force-download
+else
+ VERSION=`echo $@ | sed "s?^.*--upstream-version \([0-9.]\+\) .*${NAME}.*?\1?"`
+ if echo "$VERSION" | grep -q "upstream-version" ; then
+ echo "Unable to parse version number"
+ exit
+ fi
+fi
+
+TARDIR=${NAME}-${VERSION}
+mkdir -p ../tarballs
+cd ../tarballs
+# need to clean up the tarballs dir first because upstream tarball might
+# contain a directory with unpredictable name
+rm -rf *
+tar -xaf ../${TARDIR}.tar.gz
+
+UPSTREAMTARDIR=`find . -mindepth 1 -maxdepth 1 -type d`
+if [ "${UPSTREAMTARDIR}" != "${TARDIR}" ] ; then
+ mv "${UPSTREAMTARDIR}" "${TARDIR}"
+fi
+
+# Remove useless binaries
+# ... do something which needs to be done ...
+
+GZIP="--best --no-name" tar --owner=root --group=root --mode=a+rX -caf "$NAME"_"$VERSION".orig.tar.${COMPRESS} "${TARDIR}"
+rm -rf ${TARDIR}
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..62983db
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,22 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+export LC_ALL=C.UTF-8
+
+include /usr/share/dpkg/default.mk
+# this provides:
+# DEB_SOURCE: the source package name
+# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision)
+# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision
+# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch
+# DEB_VERSION_UPSTREAM: the package's upstream version
+# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog
+
+# for hardening you might like to uncomment this:
+# export DEB_BUILD_MAINT_OPTIONS=hardening=+all
+
+%:
+ dh $@
+
+#get-orig-source:
+# . debian/get-orig-source
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/upstream/metadata b/debian/upstream/metadata
new file mode 100644
index 0000000..d8b5812
--- /dev/null
+++ b/debian/upstream/metadata
@@ -0,0 +1,12 @@
+Reference:
+ Author:
+ Title:
+ Journal:
+ Year:
+ Volume:
+ Number:
+ Pages:
+ DOI:
+ PMID:
+ URL:
+ eprint:
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..9e06566
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,55 @@
+version=4
+
+# Uncomment to examine a Webpage
+# <Webpage URL> <string match>
+#http://www.example.com/downloads.php #PACKAGE#-(.*)\.tar\.gz
+
+# Uncomment to examine a Webserver directory
+#http://www.example.com/pub/#PACKAGE#-(.*)\.tar\.gz
+
+# Uncommment to examine a FTP server
+#ftp://ftp.example.com/pub/#PACKAGE#-(.*)\.tar\.gz debian uupdate
+
+# Uncomment to find new files on sourceforge
+# http://sf.net/#PACKAGE#/#PACKAGE#-(\d[\d\.]+)\.(?:tgz|tbz|txz|(?:tar\.(?:gz|bz2|xz)))
+
+# Uncomment to find new files on Github
+# - when using releases:
+# https://github.com/#GITHUBUSER#/#PACKAGE#/releases .*/archive/#PREFIX#(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+# - when using tags
+# https://github.com/#GITHUBUSER#/#PACKAGE#/tags .*/#PREFIX#(\d.*)\.(?:tgz|tbz2|txz|tar\.(?:gz|bz2|xz))
+# Remark: frequently you can do s/#PREFIX#/v?/ since 'v' or nothing is quite common but there are other prefixes possible
+
+# PyPi repository of Python modules
+# see https://lists.debian.org/debian-python/2015/02/msg00027.html
+# http://pypi.debian.net/#module#/#module#-(.+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+
+# Bitbucket
+# https://bitbucket.org/<user>/<project>/downloads .*/(\d\S*)\.tar\.gz
+
+# Gitlab
+# opts=filenamemangle=s/.*\.tar\.gz\?ref=v?(\d\S*)/<project>-$1\.tar\.gz/g \
+# https://gitlab.com/<user>/<project>/tags .*archive\.tar\.gz\?ref=v?(\d\S*)
+
+# if tweaking of source is needed
+# \
+# debian debian/get-orig-source
+
+# if you need to repack and choose +dfsg prefix
+# opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,compress=xz" \
+
+# If there is no chance to create a sensible watch file please read here:
+#
+# https://people.debian.org/~eriberto/#fake-packages
+#
+#version=4
+#opts=dversionmangle=s/.*/0.No-Site/ \
+#https://people.debian.org/~eriberto/ FakeWatchNoUpstreamSiteForThisPackage-(\d\S+)\.gz
+#
+#version=4
+#opts=dversionmangle=s/.*/0.No-Release/ \
+#https://people.debian.org/~eriberto/ FakeWatchNoUpstreamReleaseForThisPackage-(\d\S+)\.gz
+#
+#version=4
+#opts=dversionmangle=s/.*/0.No-Track/ \
+#https://people.debian.org/~eriberto/ FakeWatchNoUpstreamTrackingForThisPackage-(\d\S+)\.gz
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/bandage.git
More information about the debian-med-commit
mailing list